Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1757 ATGTCACAAGGGTTTGCTTTTGCACTTGTTGCTGTGTTCTTCTGTCACTTCAGCTGCTTTCTTAGCTCTGCACAAGCTCAATCTGCAAACGCCACCACTGACCCTTCTGAAGCAAGAACTATAAATTCAATCTTCAGCAAATGGGGTAAATCCGCAGACACAAGTATATGGAATATAAGCGGTGAATTGTGCAGTGGAAGAGCCATTGATAGTACCTCCACCCCTGAATCTTACAACCCATTTATCAGATGTGATTGTTCCTTTGACGACGGAACTACTTGCCGCATCACAGCACTGAGGGTCTCTGCACTGAATGTGGTTGGTGAAATTCCAGAAGAGCTATGGACTCTCACCTATCTCAACAATTTAAATCTTGCGCAAAATTACTTGACGGGTTCTCTACCTGCAGCTATTGGAAATCTAACTCGTATGCAATACTTGAGCTTTGGAATCAATAATTTATCAGGGGAGCTTCCAAAGGAATTGGGAAATCTTACAGAGTTATTATCACTGAGTTTTTCGTCAAATAAGTTCTCAGGATCTCTCCCATCTGAACTTGGGAAACTCACAAAGTTAACCCAGCTTTACATTGATAGTTCAGGAATTAGTGGTCCAATTCCGTCCTCATTTGCGGACCTAAGGAGTTTGGAACGAGTATGGGCTTCAGACACGGAACTCAGGGGCAATATACCAGACTTCATAGGGAATTGGACTAGACTTCAAGTCTTGAGGTTTCAAGGCAATTCTTTTAATGGCTCAATACCCTCATCATTTTCCAACTTGACTTCTTTAACAGAATTGAGAATAAGTGGTTTATCTGATGGGAACTCCTCACTGGAATTTGTACGGAATTTGAAATCTTTGAATATCTTAGAATTGAGGAATAACAATATTTCTGGTTCGATTCCCTCCTCCATTGGAGAGTTGCACAATTTGACCCAGCTGGATTTAAGCTTCAATAACATCGAGGGACAAATTCCGGGATCAATTTTCAATTTGAGTTCGCTCTCTACCTTGTTTCTTGGAAATAATAAGCTAAATGGCACCCTTCCAACGCAGAAAAGTTCATCATTTCAATTTATAGACTTGTCATACAATGATCTATCAGGTAGCCTCCCCTCTTGGGTAAACGATGCAAATTTACAACTGAATTTAGTTGTTAACAACTTGACAATAGATGATGATTCAGATACCAGTGGCTTGCCAAATGGGCTCAACTGTCTCCAGAAAAATTTTCCTTGCAATCAAGGTGTTGGAAGATATTCTGACTTTGCAATCAAGTGTGGCGGTTCCCAAATTACGTCCACAGAAGGAATAGTGTATGAAACGGAGAATGAGACACTTGGTCCTGCTACATACTTTGTTACTGATACAAGTAGATGGGCTGCTAGTAATGTTGGATTATTTACGAACAATAATAATCCAAAATTCACAAAATCTGTGACTAATCAATTCACTAACACTATGAATTCGGAGCTCTTCCAAACAGCACGACTCTCTCCTTCATCATTGAGATATTATGGCTTGGGGCTGGAAAATGGCTTTTACAACATCACCCTTCAATTTGCAGAAACAGCTATTGAGGATTCTACTACAAAATGGGAAAGTCTTGGGAGACGAGTCTTTGATATATATATTCAGGGGAATCTTTTCTTGAAAGATTTCGACATACAAAAGGAAGCTGGGGGCATATCATTCAGAAGTGTCCAAAAGCAATTTAGGTTTGAAGTGTCTGAAAACTATCTTGACATCCATCTCTTTTGGGCAGGAAAAGGGACTTGTTGCATACCAAATCAAGGTACTTTTGGGCCCTTGATTCAAGCCATCCATGCTATCCCAGATTTTATACCTAGTGTCAGTAACGAACCTCCAAGCAATAAAACAAATAGAACTGGCCTAATTGTTGGAATTGTTGTTGGAGTTGGAGTTGTATGCTTCCTATCAGTTTTTGTGACTTTTTGTATCATTCGGAGAAGAAAACGTCAGCATGAGGATGAAGAGCTTTTAGGAATTGATACAAAGCCATACACTTTCAGTTATTCTGAGTTGAAGAATGCTACTAATGACTTCAATATCGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGGGTTATTGCTGTGAAACAACTGTCAGTAGCATCCCATCAAGGAAAGAGCCAGTTCATAACTGAGATTGCTACTATATCAGCTGTGCAACATCGTAATCTGGTGAAACTATATGGATGTTGTATTGAGGGAAACAAAAAGCTTCTGGTGTACGAGTATCTGGAGAATAAGAGTCTTGATCAAGGATTATTCAGTAATTCTTTAACCCTCAATTGGTCCACACGCTATGATATCTGCTTGGGTGTTGCCAGAGGTTTAGCTTATTTACATGAAGAGTCTCGTCTCCGTATTGTACACCGTGATGTGAAGGCTAGCAATATTTTGCTTGACTATGAGCTTGTCCCCAAAATATCAGATTTTGGGTTGGCCAAATTGTACGATGATAAAAAGACCCACATAAGCACTCGTGTGGCTGGAACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATATATTTTCATTTGGTGTTGTTGCTCTAGAGTTAGTCAGTGGGAGACCAAATTCTGATTCAAGCTTGGAAGGAGAGAAGGTGTATCTTCTGGAATGGGCTTGGCAGCTTTATGAAAACAACCTCTTAATGGATCTGGTGGACCCTAGAATATCAGAATTCAATGAGGAAGAAGTAAAACGTGTTGTGGGAATAGCACTTCTGTGCACTCAGACATCACCATCATTAAGACCATCAATGTCCCGTGTGGTGGGAATGCTTTCAGGAGATATTGAAGTGAACAGTGTCACTACAAAGCCTGGATACCTTACTGACTGGAAATTTGATGATGTGACCAGCTTCATGACTGAGAATGCAATTGAAGGATTGAATACAAGTCACCAGTATTCATCAGGAAGTACCAGCATTGTGGGTGGTACAGACTTTACACCATTAAGTGTTTCAAAACTGAACCTTAATGATGGTCTTAGTGAGGGTAGGTAA 3093 0.4028 MSQGFAFALVAVFFCHFSCFLSSAQAQSANATTDPSEARTINSIFSKWGKSADTSIWNISGELCSGRAIDSTSTPESYNPFIRCDCSFDDGTTCRITALRVSALNVVGEIPEELWTLTYLNNLNLAQNYLTGSLPAAIGNLTRMQYLSFGINNLSGELPKELGNLTELLSLSFSSNKFSGSLPSELGKLTKLTQLYIDSSGISGPIPSSFADLRSLERVWASDTELRGNIPDFIGNWTRLQVLRFQGNSFNGSIPSSFSNLTSLTELRISGLSDGNSSLEFVRNLKSLNILELRNNNISGSIPSSIGELHNLTQLDLSFNNIEGQIPGSIFNLSSLSTLFLGNNKLNGTLPTQKSSSFQFIDLSYNDLSGSLPSWVNDANLQLNLVVNNLTIDDDSDTSGLPNGLNCLQKNFPCNQGVGRYSDFAIKCGGSQITSTEGIVYETENETLGPATYFVTDTSRWAASNVGLFTNNNNPKFTKSVTNQFTNTMNSELFQTARLSPSSLRYYGLGLENGFYNITLQFAETAIEDSTTKWESLGRRVFDIYIQGNLFLKDFDIQKEAGGISFRSVQKQFRFEVSENYLDIHLFWAGKGTCCIPNQGTFGPLIQAIHAIPDFIPSVSNEPPSNKTNRTGLIVGIVVGVGVVCFLSVFVTFCIIRRRKRQHEDEELLGIDTKPYTFSYSELKNATNDFNIENKLGEGGFGPVYKGTLNDGRVIAVKQLSVASHQGKSQFITEIATISAVQHRNLVKLYGCCIEGNKKLLVYEYLENKSLDQGLFSNSLTLNWSTRYDICLGVARGLAYLHEESRLRIVHRDVKASNILLDYELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADIFSFGVVALELVSGRPNSDSSLEGEKVYLLEWAWQLYENNLLMDLVDPRISEFNEEEVKRVVGIALLCTQTSPSLRPSMSRVVGMLSGDIEVNSVTTKPGYLTDWKFDDVTSFMTENAIEGLNTSHQYSSGSTSIVGGTDFTPLSVSKLNLNDGLSEGR* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1757 1030 Pfam Protein tyrosine and serine/threonine kinase 691 956 IPR001245 GO:0004672|GO:0006468
Pvu11g1757 1030 Gene3D Phosphorylase Kinase; domain 1 651 765 - -
Pvu11g1757 1030 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 137 1008 - -
Pvu11g1757 1030 SUPERFAMILY L domain-like 80 392 - -
Pvu11g1757 1030 Gene3D Ribonuclease Inhibitor 276 396 IPR032675 -
Pvu11g1757 1030 SUPERFAMILY Protein kinase-like (PK-like) 673 983 IPR011009 -
Pvu11g1757 1030 Pfam Malectin domain 423 609 IPR021720 -
Pvu11g1757 1030 ProSiteProfiles Leucine-rich repeat profile. 311 333 IPR001611 GO:0005515
Pvu11g1757 1030 Gene3D - 423 613 - -
Pvu11g1757 1030 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 137 1008 - -
Pvu11g1757 1030 Gene3D Transferase(Phosphotransferase) domain 1 766 969 - -
Pvu11g1757 1030 SMART serkin_6 690 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1757 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Pvu11g1757 1030 Gene3D Ribonuclease Inhibitor 34 275 IPR032675 -
Pvu11g1757 1030 ProSiteProfiles Protein kinase domain profile. 690 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1757 1030 CDD STKc_IRAK 696 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1757 Pvu-Chr11 43982318 43999989 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1757 144 983 Receptor kinase-like Gene Family AT1G56120 64.024 0.0 1115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1757 PK_Tyr_Ser-Thr 3.1e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0818 5 17182836 17189337 Pvu11g1757 11 43982318 43999989 PCT
Pvu11g1757 11 43982318 43999989 Pvu5g0811 5 16446578 16455987 PCT