Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1748 ATTCTTAACAATTTCGCAGTGTACAGAGAAATGGCCATTGTTCTTATTTGCAAGCTTTTGTTTCTCTTTTCTCAAATCTCCAATGCAGCTCTCACCATCACCGACCTCCACCCACTTTCCGACGACGGCACCACCTTGGTTTCCGAGGAGGGAACCTTCGAGATGGGTTTCTTCTCTCCGGGGAGTTCCAACAACCGCTACGTCGGAATCTGGTACAGAAACATCCCTGTCAAAACAGTGGTTTGGGTTGCGAACCGCGACAATCCAATCACACGCGACAACTCGACCACAAACAAGATGGTCGTAACGCAAGACGGAAACCTCGTACTTGTCACCCAGAACGACACTCTTGTCTGGTCTGCAAATGCAACGAAGAAGGTTTCGAATCCAGTTGTGCAGCTCTTGGACTCTGGAAACCTTGTAATAAGAGATGCAAATGAAGATTCTGTTTTTCTATGGCAAAGCTTTGACTTTCCCTGTGACACACTGCTACCAGGGATGAAGCTAGGGTGGGACTTAGAAAGTGGTCTTAATCGGCGTCTCACTGCATGGAAAACATGGGATGATCCATCTTCAGGGGACTTTTCTTGGGGAGTGGAGTTAGGAAGCAACCCTGATATCGTGATGTGGAAGGGTGAAACTGAGTACTTCAGAACTGGACCTTACACTGGGAACATGTTCAGTGGAGTATATGGTCCCAGGAATAACCCTCTTTATGATTATGTTTTTGTGAATAAGAAAGATGAAGTGTATTACAGATACACCCTGAGAAACGCTTCAGTCATCACCATAATCGTGATGAACCAAACCCTTTATCTTCGCCATCGTGTTACGTGGATTCCCGAAGCCAAAGCTTGGACCATTTACCAGTCCTTGCCACGAGACAGTTGTGATGTGTACAACACCTGTGGACCCAATGGGAATTGTGCCATTGCTGGCTCACCGATTTGCCAGTGCTTAGATGGGTTCGTGCCGAAGTCGTCACAGCAGTGGAATGCAATGGATTGGAGACAAGGGTGTGTGCGAAGTGGAGAGTGGAAATGTGGGGTGAAGAACAAAGATGGTTTTCGTAGATTTGGTGGGATGAAATTGCCAAACACCACACATTCTTGGGTGAATGAAAGTATGAGACTTGAGGAGTGTAGGGCTAAGTGTTTGAAAAACTGTTCTTGCAGTGCTTATTCGAGTTTGGACACCAGAGGAGGAGGTAGTGGCTGCTCTATTTGGGTTGGAGATCTCTATGATTTGAGAGTTATAGAAAGTGGGCAAGATTTGTATGTTCGAATTGCCACTTCAGATACAGATGGTAAACATAGGCAAAGGAAAAAGATAATCGTGGTGGCTTCCGTCACAACATCGTTCGTGTTAGTGATGCTATTAACATTATGTATTTACATAGTCAAACGAAAATATAAAG 1417 0.4524 ILNNFAVYREMAIVLICKLLFLFSQISNAALTITDLHPLSDDGTTLVSEEGTFEMGFFSPGSSNNRYVGIWYRNIPVKTVVWVANRDNPITRDNSTTNKMVVTQDGNLVLVTQNDTLVWSANATKKVSNPVVQLLDSGNLVIRDANEDSVFLWQSFDFPCDTLLPGMKLGWDLESGLNRRLTAWKTWDDPSSGDFSWGVELGSNPDIVMWKGETEYFRTGPYTGNMFSGVYGPRNNPLYDYVFVNKKDEVYYRYTLRNASVITIIVMNQTLYLRHRVTWIPEAKAWTIYQSLPRDSCDVYNTCGPNGNCAIAGSPICQCLDGFVPKSSQQWNAMDWRQGCVRSGEWKCGVKNKDGFRRFGGMKLPNTTHSWVNESMRLEECRAKCLKNCSCSAYSSLDTRGGGSGCSIWVGDLYDLRVIESGQDLYVRIATSDTDGKHRQRKKIIVVASVTTSFVLVMLLTLCIYIVKRKYK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1748 472 ProSiteProfiles PAN/Apple domain profile. 348 430 IPR003609 -
Pvu11g1748 472 PANTHER - 17 448 - -
Pvu11g1748 472 PIRSF SLG 4 447 IPR035446 -
Pvu11g1748 472 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Pvu11g1748 472 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Pvu11g1748 472 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 17 448 - -
Pvu11g1748 472 Pfam D-mannose binding lectin 79 185 IPR001480 -
Pvu11g1748 472 CDD EGF_CA 295 327 - -
Pvu11g1748 472 SMART blect_4 36 159 IPR001480 -
Pvu11g1748 472 CDD PAN_AP_plant 351 430 - -
Pvu11g1748 472 Gene3D Hepatocyte Growth Factor 347 430 - -
Pvu11g1748 472 SMART ntp_6 351 429 IPR003609 -
Pvu11g1748 472 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 190 IPR036426 -
Pvu11g1748 472 Pfam PAN-like domain 348 416 IPR003609 -
Pvu11g1748 472 Gene3D - 26 156 IPR036426 -
Pvu11g1748 472 CDD B_lectin 42 159 IPR001480 -
Pvu11g1748 472 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1748 Pvu-Chr11 43867226 43870469 Transposed