Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g1747 | AAAACAAAAACAAAAATGGCGACAGAGGATGAAAATGATGGAAAACAAGAAGATTTGGAGCTTCCTTCCTTTGATCTTACTACAGTGATTAGAGCCACTAATAACTTCTCAATTGAGAATAAACTAGGTGAAGGTGGTTTTGGACCTGTGTACAAGGGTACATTAGTAGATGGTCAAGAAATTGCAATCAAAAGACTTTCACGAAGTTCAGGACAAGGATTGAAAGAATTTAGAAATGAGGTAATATTGTGTGCCAAACTTCAACATCGGAATCTTGTTAAGGTTATTGGTTATTGCATTGAACAAGAGGAGAAGATGTTGCTTTATGAATACATGCCCAACAAAAGTCTTGATTTAATTATTTTTGATTCATATAAAAGTAAGAATTTAGAGTGGCAAATGCGCTTTAACATTTTGAATGCAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTCAAAGCAAGTAATATTCTACTAGACAATGATATGAATCCAAAAATATCTGATTTTGGTCTTGCAAGAATATGTGGAAGTGATCAAGTCGAAGGAAGTACAAGCATCATAGTTGGAACTCATGGTTACATGGCTCCAGAGTATGCTATTGATGGGTTGTTCTCAACAAAATCGGATGTGTTTAGCTTTGGAGTGTTATTACTAGAAATTCTTAGTGGAAAGAAAAATAGAGTATTTACCTTCCAAGACAACAATCATAACCTTATTGACCATGCCTGGAATTTGTGGAAAGAAGGTACTCCAGAGCAATTGATTGATGCTTGTTTGGAAAACTCATATAATGTGTTGCAAGTTGTACGATGCATTCAAATCGGTCTTTTATGTCTACAGCAACATCCAAATGATAGGCCAAACATGACATCAGTTGTTGTTATGTTGACCAGCGAGAATTCTTTACCTGAACCTAAGGAGCCTGGTTTCTTAATTAGAAGGGCCTCAAAAGATGGAGAAAATTCTTCTAATAGACAAACATCTTCTTCAGTCAATGAAGTCTCTATCTCACTTTTAAATGCTAGATAA | 1062 | 0.3512 | KTKTKMATEDENDGKQEDLELPSFDLTTVIRATNNFSIENKLGEGGFGPVYKGTLVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVIGYCIEQEEKMLLYEYMPNKSLDLIIFDSYKSKNLEWQMRFNILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARICGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEILSGKKNRVFTFQDNNHNLIDHAWNLWKEGTPEQLIDACLENSYNVLQVVRCIQIGLLCLQQHPNDRPNMTSVVVMLTSENSLPEPKEPGFLIRRASKDGENSSNRQTSSSVNEVSISLLNAR* | 354 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g1747 | 353 | SMART | serkin_6 | 36 | 307 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pvu11g1747 | 353 | Pfam | Protein tyrosine and serine/threonine kinase | 37 | 306 | IPR001245 | GO:0004672|GO:0006468 | |
| Pvu11g1747 | 353 | CDD | STKc_IRAK | 42 | 308 | - | - | |
| Pvu11g1747 | 353 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 111 | - | - | |
| Pvu11g1747 | 353 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 157 | 169 | IPR008271 | GO:0004672|GO:0006468 | |
| Pvu11g1747 | 353 | Gene3D | Transferase(Phosphotransferase) domain 1 | 112 | 318 | - | - | |
| Pvu11g1747 | 353 | ProSiteProfiles | Protein kinase domain profile. | 36 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pvu11g1747 | 353 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 3 | 346 | - | - | |
| Pvu11g1747 | 353 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 3 | 346 | - | - | |
| Pvu11g1747 | 353 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 319 | IPR011009 | - | |
| Pvu11g1747 | 353 | MobiDBLite | consensus disorder prediction | 332 | 353 | - | - | |
| Pvu11g1747 | 353 | MobiDBLite | consensus disorder prediction | 328 | 353 | - | - | |
| Pvu11g1747 | 353 | Pfam | Domain of unknown function (DUF3403) | 309 | 353 | IPR021820 | GO:0004674 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu11g1747 | Pvu-Chr11 | 43864532 | 43865932 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu11g1747 | 1 | 353 | Receptor kinase-like Gene Family | AT4G23150 | 52.078 | 2.99e-129 | 383 |
Transcription factors information