Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1741 ATGCGGTTAATCCATGTTCTTGTCTTAGGGTTTGTGGCTCTTCATGTTTTTGAATCCAATGCTCAACTCATACCACAAGATGAAGTGAAAGTACTGCAAGCAATATCTGATAAACTAGAGAACTTGAATTGGACAGTTACCGAGCATTCCTGCGCAGAAGATGGAGGGTTCGGTGACAGGATTAATATAAGGAATGACACCGTGAGGAATGTCTCATGCGATTGCAACTTCCAAAATAACACAGTTTGCCATGTTGATAGCATCTTTCTGAAGGCTCAAAATATAGCTGGAGTTTTTCCCAGTGAATTTGGAAATCTCACTCATCTGAAAGTGCTTGATCTAACACGCAACTATATCAACGGCTCGCTTCCAAAAAGTTTTCCACCCAATGCTACACTCACCAATTTGTTACTTCTGGGAAACCGTCTAAGTGGTCCAATTCCCTCAGAAATTGGTGATATTGCTAATTTGGAGGAACTGGTCTTAGATTGTAACCAACTTGAAGGACCACTTCCTTCTAGTCTTGGAAATTTGAGCAACTTGAAGAGACTGCTTCTTTCTGCAAATAATTTTACAGGGACCATACCAGAAACATTTGGAAAACTTGAAAATCTGACTGATTTTAGGATAGATGGAAGCAGTTTATCTGGACCAATACCCAGTTTCATTGGAAACTGGACCAAACTTAACAGACTGGATTTGCAGGGAACAAATATGGAAGGCCCAATTCCTTCCACTATATCTCAGTTGAAACTTTTGACTAATTTGAGAATAACAGATTTGAAAGGATCAGCAACTATGAATTTTCCTGATCTGGAGGAGTTGAAAAACATGGAGCGACTGGAATTAAGAAATTGCTTAATCAAGGGTGACATTCCAGATTACATCGCTCAAATGTCATACTTAGACACTTTGGACCTAAGCTTCAACATGTTAACTGGTCCAGTCCCAGATTTTATACCAAATTTAGGGAAGCTAGATTACTTGTTTCTGACAAATAATTCGCTGAGCGGAGAAATTCAGGACTGGATACTGAGCTTTAAACATAACATAGATTTATCTTACAACAATTTTACTAAGTCTTCTGCATCTAGCTGCCAGCTCTCTGATGTGAACTTGGCTTCAAGTCATTCTTCTTCTTCAGTGGCAACTACGGCTTCAACTTTTTGTTTGAAGAGGAACCTTCCTTGTGCAGGACAACCCCAGTATAAGTCATTGTTCATAAACTGTGGAGGAGGTGAGGGGGAGTTTGAAGGCAATAACTATGTAGGTGACCTCCATCTAAATGGCATTTCAAACTTTGATCTTAGAAGTGAAGAACAATGGGCATATAGCAGCACAGGAGTATTTATGGGAAATTATAGTGCAAATTATGTAGCAGAAAATGTATTTTCTTTGAACATTAGTGGTCCAGAATATTACCAGAACGCTCGCCTTTCCCCTATGTCGCTTAACTACTATGGCCTTTGTATGCCAAACGGCAACTATAAAGTGAAGCTCCATTTTGCCGAGATAATGTATTCTGATGATCAAACTTATAGAAGTCTAGGAAGGCGCATATTTGATGTTTCAGTTCAAGGTTTTAGATATCTGCAAGACTTTAACATTGTGGAAGAGGCTGGTGGAGTTGGAAAGGGCATCACTAAGGAATTTGATGTTGATGTTCATGATGGTACCTTGGAAATCCACTTATACTGGGCAGGGAAAGGAACTACTTCCATTCCTGATAGAGGTGTATATGGACCTCTTATATCTGCTATTGAGATGATACCAAACTTTGAGAATCCTTCAAAAGGGCTGTCTGCTGGAGTCATTGCTGGAATTGTTGCTGCATCATGTGGGTTTGTCATATTGATACTGGTTGTCCTTTGGAAGATGGGTCTTCTTTGTAGGAAAGATACAACTGATAGAGAACTTCTAGATATGAAAACGGGCTATTACAGCTTAAGACAAATTAAAGGAGCTACTAATAACTTTGACCCTGCAAATAAGATAGGTGAAGGAGGATTTGGGCCTGTATACAAGGGTGTGCTGTCAGATGGTGATGTGATTGCAGTTAAGCAGCTCTCCTCCAAATCAAAGCAGGGGAACCGAGAATTTGTCAATGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTGGTGAAGCTATATGGTTGTTGCATTGAAGGAAACCAGTTGCTACTGATATATGAATACATGGAGAACAACAGTCTTGCTCGTGCACTTTTTGGTGAAGAAGAGCAGAAGCTGCACTTAGACTGGCCTACAAGAATGAAGATCTGTGTGGGGATAGCAAGGGGACTGGCTTATCTTCACGAGGAATCAAGGTTGAAAATAGTGCACAGGGACATTAAGGCAACCAATGTCTTACTTGACAGGGATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTGATGAAGAAGAAAATACTCATATCAGTACACGTATAGCTGGAACAATTGGTTACATGGCCCCGGAATATGCTATGAGGGGTTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTAGTGGAAAAAGCAACACAAAATACAGGCCAAAGGAAGAGTTTGTATATCTTCTAGATTGGGCTTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAATTGGTGGATCCAAGTCTTGGTTCAAAGTACTCTCAAGAGGAAGCCATGAGAATGCTGAGCTTGGCACTCTTGTGCACCAATCCATCTCCTTGA 2754 0.4027 MRLIHVLVLGFVALHVFESNAQLIPQDEVKVLQAISDKLENLNWTVTEHSCAEDGGFGDRINIRNDTVRNVSCDCNFQNNTVCHVDSIFLKAQNIAGVFPSEFGNLTHLKVLDLTRNYINGSLPKSFPPNATLTNLLLLGNRLSGPIPSEIGDIANLEELVLDCNQLEGPLPSSLGNLSNLKRLLLSANNFTGTIPETFGKLENLTDFRIDGSSLSGPIPSFIGNWTKLNRLDLQGTNMEGPIPSTISQLKLLTNLRITDLKGSATMNFPDLEELKNMERLELRNCLIKGDIPDYIAQMSYLDTLDLSFNMLTGPVPDFIPNLGKLDYLFLTNNSLSGEIQDWILSFKHNIDLSYNNFTKSSASSCQLSDVNLASSHSSSSVATTASTFCLKRNLPCAGQPQYKSLFINCGGGEGEFEGNNYVGDLHLNGISNFDLRSEEQWAYSSTGVFMGNYSANYVAENVFSLNISGPEYYQNARLSPMSLNYYGLCMPNGNYKVKLHFAEIMYSDDQTYRSLGRRIFDVSVQGFRYLQDFNIVEEAGGVGKGITKEFDVDVHDGTLEIHLYWAGKGTTSIPDRGVYGPLISAIEMIPNFENPSKGLSAGVIAGIVAASCGFVILILVVLWKMGLLCRKDTTDRELLDMKTGYYSLRQIKGATNNFDPANKIGEGGFGPVYKGVLSDGDVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGEEEQKLHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDRDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTKYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSKYSQEEAMRMLSLALLCTNPSP* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1741 917 Gene3D Ribonuclease Inhibitor 263 390 IPR032675 -
Pvu11g1741 917 CDD STKc_IRAK 665 917 - -
Pvu11g1741 917 SMART serkin_6 659 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1741 917 ProSiteProfiles Protein kinase domain profile. 659 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1741 917 SUPERFAMILY Galactose-binding domain-like 465 570 IPR008979 -
Pvu11g1741 917 SUPERFAMILY L domain-like 59 363 - -
Pvu11g1741 917 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 64 917 - -
Pvu11g1741 917 Pfam Malectin domain 405 587 IPR021720 -
Pvu11g1741 917 Pfam Leucine rich repeat 156 213 IPR001611 GO:0005515
Pvu11g1741 917 Pfam Leucine rich repeat 84 143 IPR001611 GO:0005515
Pvu11g1741 917 SUPERFAMILY Protein kinase-like (PK-like) 642 916 IPR011009 -
Pvu11g1741 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Pvu11g1741 917 PANTHER - 64 917 - -
Pvu11g1741 917 Gene3D - 405 592 - -
Pvu11g1741 917 Gene3D Transferase(Phosphotransferase) domain 1 735 917 - -
Pvu11g1741 917 Gene3D Ribonuclease Inhibitor 70 262 IPR032675 -
Pvu11g1741 917 Gene3D Phosphorylase Kinase; domain 1 626 734 - -
Pvu11g1741 917 Pfam Protein tyrosine and serine/threonine kinase 663 881 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1741 Pvu-Chr11 43797552 43809211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1741 6 917 Receptor kinase-like Gene Family AT1G53440 61.413 0.0 1117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1741 PK_Tyr_Ser-Thr 3.8e-49 CL0016