Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1740 ATGGATTCAATACCATTTGTTGAAACTCAATTGCATATTGCTGCACGTGCAGGGCATATTCAATTTGTCAATGAGATCATGCTATTAAAGTCGTCCTTTTCTTGGAAATTTAATCCCCAAGGATTAAGACCAGTCCACCTCGCTCTACAACAAGGCCACATCAGAATAGTCCTTGACCTTGTTAAGATGGACAAAGAACTTGTTCGAGCTAAAAGGAGAGGAGGTCTCATTCTTCTACATTTGGCAAGTCAATTGAGAGATATAACCCTTTTGGCTGTCTTTCTTGAAGCTTGCCCAGATTCAGTGAAAGACTTTACGGTTAGAAGTGAGACTGCATTGCATTTATACGAGAGGTTTGAGGTTTTCGAGTTCTTATTTAGATGGCTCAAGACAAAGATAGATATTGATAAGCTCCAAACCATTCTGAACCAGAGAGACGTGGAGGGCAACACCATTCTACACATTGCAACAACAAGAAATGACACAAAGGTAAATTCTTGTCTCTATGGATTTAGTGTAGTAGCATTTGTTGAAAACCGAAAATGTTTTACAAGCATTACAAGCTAA 567 0.388 MDSIPFVETQLHIAARAGHIQFVNEIMLLKSSFSWKFNPQGLRPVHLALQQGHIRIVLDLVKMDKELVRAKRRGGLILLHLASQLRDITLLAVFLEACPDSVKDFTVRSETALHLYERFEVFEFLFRWLKTKIDIDKLQTILNQRDVEGNTILHIATTRNDTKVNSCLYGFSVVAFVENRKCFTSITS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1740 188 PANTHER HOMEOBOX PROTEIN WARIAI 1 162 - -
Pvu11g1740 188 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 162 - -
Pvu11g1740 188 SUPERFAMILY Ankyrin repeat 8 171 IPR036770 -
Pvu11g1740 188 SMART ANK_2a 148 177 IPR002110 GO:0005515
Pvu11g1740 188 SMART ANK_2a 108 137 IPR002110 GO:0005515
Pvu11g1740 188 SMART ANK_2a 40 69 IPR002110 GO:0005515
Pvu11g1740 188 SMART ANK_2a 74 104 IPR002110 GO:0005515
Pvu11g1740 188 SMART ANK_2a 6 35 IPR002110 GO:0005515
Pvu11g1740 188 Gene3D - 5 186 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1740 Pvu-Chr11 43782704 43783270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1740 1 186 Miscellaneous Gene Families AT4G10720 40.415 1.65e-40 140