Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1718 ATGGAATCTGTTAAGCCATCAGCAGTGACACCAAGCAAGAGCAAGTTGGCTCGCACTTTTGCCAAAGTTCTTCACGTTAGAGCAGTGAGCGGAATTGCACCAGTTGATGGACTGAAGAACGTTAAAGTGGATGCAGATCTCAGCACTGAAGCAAATATGTGTAAGAGTAGTATAAACAAAGAAGATGAAGAGCTTGAGAAAAGAAAGGGCACAGAAGCTTTGCTTGCAAAATCATTTGCTAGCATTTCGACTGTAAAAGCTTCATATGCTCAGCTACAGCATGCTCAGTCTCCCTATGACCCTGATGTAGTTCAAGCCGCTGACCAATTGATAGTCTCAGAGTTCAAGACCTTGTCCAAGCTAAAGCAATGTTTATTTAAAAAGCAAATTGATCCTTCACCAGATAGAACTATTCTTGAAGCTAAATTGAAGGAGCTAGAGAGTGTCAACAAAACATTTGAGATCACAGGGGAGAAGTTAGAATCACAGACTCGGCTCAAAGAATCTGAGATTGTGTATCTTCGAGAAAAGCTTGAGGAAGCTAACCTGCAGAACAGGTCAATTGAGAAGAGGTTAAATCAAAGTGGATCATTATCAGTTCTTGACAACCTCCACATTTCAGGATTAAGTCCTAGCCATTTTGTTACTGTTCTTCGCCACACAGTTAGGTCCATTCGAAACTTTGTGAAAATGTTAGTGAATGAGATGAGATCTGCAGGTTGGGATATTGATGCTTCAGTCAATGCCATTATTGAGCAGAATGTGGTTTACTGGAAAGAAGATCACAGGTGTTTTGCAATTGAGTCCTTTGTGTGTAGGGAGATGTTTGATTCTTTCACCTTCCCTAACTTCTCCCTCCCCAATGAGTCCCTGCCAGATAGGAACAAAAGGCAACTGTTCTTTGGGAGGTTCAACGAGCTAAAATCTGTGAAAGCAAAGGAGTTTCTTGCAGGCAATTCAAAGTCACCATTTGCAAAATTCTGCAGGATCAAGTTCTTGAGACTTGTTCACCCCAAGATGGAGGCATCATTCTTTGGCAATGTGAACCAGAGGAACCTGCTGAAGGCTGGAGAGTTTCCTGACACCAACTTCTTTACCTCATTTGCTGAGATGGCCAAGAGGGTCTGGCTCCTACATTGCCTGGCCTTTTCCTTTGAGCCTCAAGCTTCAATCTTTCAAGTGGTGGGGAGTGGCTGTAGATTCTCTGATGTGTACATGGAGAGTGTGAATGAAAATGATGAAGAAATGGCAATGGAATCTGAGCCACAAGTTGCTTTCACTGTTGTTCCAGGGTTTAGGATTGGTAAAACTGTTATACAGTCTCAAGTCTACCTCTCACAGCACCAAAGCATAGTAAAAAAATCCATATGCAGAGATAAAAAAAGGTAG 1389 0.4212 MESVKPSAVTPSKSKLARTFAKVLHVRAVSGIAPVDGLKNVKVDADLSTEANMCKSSINKEDEELEKRKGTEALLAKSFASISTVKASYAQLQHAQSPYDPDVVQAADQLIVSEFKTLSKLKQCLFKKQIDPSPDRTILEAKLKELESVNKTFEITGEKLESQTRLKESEIVYLREKLEEANLQNRSIEKRLNQSGSLSVLDNLHISGLSPSHFVTVLRHTVRSIRNFVKMLVNEMRSAGWDIDASVNAIIEQNVVYWKEDHRCFAIESFVCREMFDSFTFPNFSLPNESLPDRNKRQLFFGRFNELKSVKAKEFLAGNSKSPFAKFCRIKFLRLVHPKMEASFFGNVNQRNLLKAGEFPDTNFFTSFAEMAKRVWLLHCLAFSFEPQASIFQVVGSGCRFSDVYMESVNENDEEMAMESEPQVAFTVVPGFRIGKTVIQSQVYLSQHQSIVKKSICRDKKR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1718 462 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 445 IPR040225 GO:0009639|GO:0009959
Pvu11g1718 462 Coils Coil 143 163 - -
Pvu11g1718 462 Coils Coil 171 191 - -
Pvu11g1718 462 Pfam Plant protein of unknown function (DUF641) 67 191 IPR006943 -
Pvu11g1718 462 PANTHER OS01G0203800 PROTEIN 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1718 Pvu-Chr11 43492936 43497825 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0839 5 19242891 19247870 Pvu11g1718 11 43492936 43497825 ECH
Pvu11g1718 11 43492936 43497825 Pvu11g1718 11 43492936 43497825 ECH