Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g1639 | ATGTTCCCATTGCATCCTAATAAAAACAAAATCATTCGACCTGTGATCAAACAACTCATCATGGACCAGAACAACACTGTTCCAAGAATTCATGCATTCTCAGCAGCAGCACCACCTTCCCCTCCCATGTTTTCCTTCATCATTGCTCTTTCCATCGCAGCACTAATTTTCATGTGCTTCCACGTTTTCTCAGGCATTGCTTCAGCAGCCATTCTTCTAGCCCTTTGCATCACCACCCTCTTCCTTTGCAGGTTTACGCATGATCGCGAATTGAGAGAAGCAGCCTCTTTTCATGCACAAACTCCACAGAATAACCACAGGGTGGTGAAAATTCTCAATAAGCTTTTCTGGGTTGTTGAGTACAAAAGGGGTGGCCAAAGGCAACAAGTCAAGAAGCTGCTTGGATCAATTGTGTGCTTTGAAAACCAAGCATTGGTATCAGGGAGTGAATGTGCTATTTGCTTGGAAGAGTTCAAGAAGGGAGAAAAGTGCCTTGTGTTCTCATTTTGTGGCCACACCTTCCACTGTGACTGTATCAACACCTGGTTTGAGGAAAAACCCACTTGCCCAAATTGCCGTTATGTGCCATCAGCCACCATAACCTCTGTTGACATCAAAACATATCAGTTTACAATTTGA | 639 | 0.4382 | MFPLHPNKNKIIRPVIKQLIMDQNNTVPRIHAFSAAAPPSPPMFSFIIALSIAALIFMCFHVFSGIASAAILLALCITTLFLCRFTHDRELREAASFHAQTPQNNHRVVKILNKLFWVVEYKRGGQRQQVKKLLGSIVCFENQALVSGSECAICLEEFKKGEKCLVFSFCGHTFHCDCINTWFEEKPTCPNCRYVPSATITSVDIKTYQFTI* | 213 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g1639 | 212 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 118 | 198 | IPR013083 | - | |
| Pvu11g1639 | 212 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED | 5 | 199 | - | - | |
| Pvu11g1639 | 212 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 5 | 199 | - | - | |
| Pvu11g1639 | 212 | SMART | ring_2 | 151 | 192 | IPR001841 | - | |
| Pvu11g1639 | 212 | Pfam | Ring finger domain | 150 | 193 | IPR001841 | - | |
| Pvu11g1639 | 212 | ProSiteProfiles | Zinc finger RING-type profile. | 151 | 193 | IPR001841 | - | |
| Pvu11g1639 | 212 | SUPERFAMILY | RING/U-box | 139 | 196 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu11g1639 | 70 | 193 | C3H Transcription Factor Family | AT3G10910 | 30.000 | 2.43e-13 | 63.9 |