Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1635 ATGGACCCTGACGACGTCGAGAATCCACCTCCGGTGACTACCAGCACAACCAATTCGATGAAGCTGAAAGAGGCCATAAGGCATGATGTGATTGACATAGACCACAACGGCAATGATTTTGCTAAATTAGTATTAATTGGTGATAAAGTTAGTAAAATTGAGAAGGGGAAGGCGATAGCAACCATTCATGATGGTTATGGTGATCATCAAAATATGGAATTGTTTGATGATGTTATGGATAAATCTGGATCAGGTGATGGGCATAATTCTGACAGCTCATGTGATGATGATGACTACTCTGATTTGTTTTCGGATGATTACATGGACGTAGACCAATATGCTTTACTACAGTCACATTTTGATAATGTGGACATACCTCCCGGAATTGAGGTACCTATTCCTTGGTTGGCAGAGTATGATATAGGTTCAAAAAAGACTAACAATGATTCGTTGCCTCCATGGTCTCATACCAAGTCTGGTGCTTACAATTCTCAAGTGACTGATTTATCTCAGCCTTCATTAACATTAGAGCCTACTAACCTTGAAACCCAAGGACCTTCAGGTAATTCTAATTTGCAAGTTAAAATGAATAAGCACCCTTCTGCACAAGAGTCATCTTCCCCTCTGGTAACTTGCCCGAGTAAGAAGAAATCAAATGCCCCAAAACACAGGAAGCATAAGTTAAAGTTGGCATTTGGAATGAAGTCATCTAAATCTAATTGTGCTCCTGCTAACCACATCTTTGTAGACAATTTTGAGGCCAAGAAACTGCCAGATGTAAGTGAGGTACTAAATTGGGGACATTTTGGAAATTCTAAGACAGCAGTTGGAAGTAACACTTTACATCATTCAAATTTTGTTGGATCTTCTTTTCATTTTCCTGGAGCTGGATTTAGTAACGATATGTGGTTAAAGAAAGATTTTCATTTTCCGGCAGTCCCTAGTTATAAATATAAATCAAGTTTTGTTGGTCCCTTTGTTCCTTTTCATGCTCCTCCCGAGCATTTGTTTGATAACTCTTGGCTTCATTGTTCTGTGGGAGATGGAAATAATGAAGCAGCTGCAGCTGCCGATAATACTGTTGCTACAATATCTGATGAAGCTAGAGACGAAATTTTGAGAAAATTTCAAAATTTTAAACAATTTGACACCATTGAAAACACTTCAGATCATTACTTTGTTAACGCCAGCTGTTCCGGGACACAGATTCCACAGAGTTGTGCTAAAAGAATCCAGGAAGAGTGGAAGTCATTGGAGAAGGATTTACCGGATTCAATATTTGTCAGAGTCTATGAATCAAGAATAGATCTTTTGAGGGCAGTAATTATTGGAGCAGAGGGAACGCCTTATCATGATGGCCTTTTCTTTTTTGATGTTTTCTTCCCAAGTACCTATCCCACTGTACCCCCGCAAGTCCACTACCACTCTTGTGGGCTTCGGCTCAACCCAAATTTATATAGTTGTGGAAAAGTTTGCCTTAGTCTACTTAACACCTGGACTGGCAATAAGTATGAGAAGTGGATTCCAGATGTTTCAACAATTTTACAGGTTCTGGTCTCTATACAGGGTCTAATCTTGAATTCAGAGCCATACTATAACGAGCCTGGATATGGCCGTCTCATAGGTTCTAGAGAGGGTACATTTAATTCCTTGCATTACAATGAGAACACATTCATCTTATCATTGAGGACAATGGTGTATATCATGAGAAGACCTCCAAAGTGA 1725 0.3936 MDPDDVENPPPVTTSTTNSMKLKEAIRHDVIDIDHNGNDFAKLVLIGDKVSKIEKGKAIATIHDGYGDHQNMELFDDVMDKSGSGDGHNSDSSCDDDDYSDLFSDDYMDVDQYALLQSHFDNVDIPPGIEVPIPWLAEYDIGSKKTNNDSLPPWSHTKSGAYNSQVTDLSQPSLTLEPTNLETQGPSGNSNLQVKMNKHPSAQESSSPLVTCPSKKKSNAPKHRKHKLKLAFGMKSSKSNCAPANHIFVDNFEAKKLPDVSEVLNWGHFGNSKTAVGSNTLHHSNFVGSSFHFPGAGFSNDMWLKKDFHFPAVPSYKYKSSFVGPFVPFHAPPEHLFDNSWLHCSVGDGNNEAAAAADNTVATISDEARDEILRKFQNFKQFDTIENTSDHYFVNASCSGTQIPQSCAKRIQEEWKSLEKDLPDSIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSTYPTVPPQVHYHSCGLRLNPNLYSCGKVCLSLLNTWTGNKYEKWIPDVSTILQVLVSIQGLILNSEPYYNEPGYGRLIGSREGTFNSLHYNENTFILSLRTMVYIMRRPPK* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1635 574 Pfam Ubiquitin-conjugating enzyme 410 531 IPR000608 -
Pvu11g1635 574 MobiDBLite consensus disorder prediction 176 214 - -
Pvu11g1635 574 MobiDBLite consensus disorder prediction 1 20 - -
Pvu11g1635 574 SMART ubc_7 409 566 - -
Pvu11g1635 574 SUPERFAMILY UBC-like 396 573 IPR016135 -
Pvu11g1635 574 Gene3D Ubiquitin Conjugating Enzyme 365 574 IPR016135 -
Pvu11g1635 574 CDD UBCc 409 535 IPR000608 -
Pvu11g1635 574 MobiDBLite consensus disorder prediction 176 225 - -
Pvu11g1635 574 MobiDBLite consensus disorder prediction 77 95 - -
Pvu11g1635 574 MobiDBLite consensus disorder prediction 77 97 - -
Pvu11g1635 574 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 15 574 - -
Pvu11g1635 574 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 406 566 IPR000608 -
Pvu11g1635 574 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 15 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1635 Pvu-Chr11 41542019 41546164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1635 362 574 Miscellaneous Gene Families AT2G33770 49.767 2.40e-67 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0748 5 12278834 12284796 Pvu11g1635 11 41542019 41546164 PCT