Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1620 ATGTCTACAACTTCCTCTTCATTAGAGAGTTTAGCAGTGAATCAAACCATCCAAGATGGAAAGAATGAGACTTTGGTTTCAGCAGGAAATTCAGCCAGAAGATATTTGGGTATATGGTACATAAACGTATCCCCTTTCACTGTGATTTGGGTGGCTAACCGAAATACACCTCTTGAGAATAACTCAGGAGTTCTCAAACTCAACCAAAAAGGGATTCTTGTGCTTCTCAATGGCACAAACAACATCATTTGGTCATCACCCAACAGATCAAGTAACACAGTGAATGATCCAATAGCTCGTCTTTTGGATTCAGGAAATTTTTTAATGAGAAATGGAGGGGAAACAAACGAGGAGAGCGCCTTGTGGCAGAGTTTTGATTATCCGGGTGATACACACATGCCAGAAATGAAAATTGGATGGAACCTAGAGACTGGTGTGGAAAGATATATAGCATCTTGGAAAAGTGATGAGGATCCTGCAGAGGGAGAATATGTTGTAAAAGTGGATCGTAGAGGGTATCCTCAAATAATGAAGTTCAAGGGAGCTGAAATAAAATCGAGAGTAGGGTCATGGAATGGTTTTTCTCTTGTTGGAAATCCTATTCCAGCTCGTGGTACGTCAGCAAGATTTGTGTTCAATGAAAAAGAGCTGTATTTTTGGTACACTCTTATTGATGGATTGGAGTTCTTTGTGTTTACACTGACCCCTTCAGGCACAGGACAAAGTTGGTTTTGGACAACTGAAACAAGGACACGACAAGTGATCTCAAGTGGGGAGCAAGATCAATGCGAGAATTATGCCTTTTGTGGTGCAAATTCTGTATGCATTTATGATGGAAACTATCCAGTTTGTGAATGCCTCAGAGGGTATGTTCCCAAGACACTTGATCAGTGGAACATATCAATTTGGCAGAATGGCTGTGTGCCAAGGGATAAATCTAACTGTACGAACAGATACACAGATGGCTTCTTGAAATACACTCACATGAAGTTGCCAGACACTTCTTCATCATGGTTTGATGCAACCATGAACCTTGATGAATGTATGAAGTTGTGCATTGAAAACTGTTCTTGTACAGCATGTGCAAATTTAGATGTTCGTGATGAAGGAAGTGGTTGTCTGCTTTGGTTTAATAATCTGGTTGACATGAGGAATTTCTCTCAATGGGGACAAGACTTTTACATCAGAGTCCCTGCTTCCGAATTAGATCATGATGGCAATGGAAACATCACAATAAAGATAGTCGCAATTACAGTTGGTGTGATTATTTTCGGATTAGTCACATGTGCATGCATATTTGGGAGAAAAAATCCAGGGATAGCTAGAAAAATTTATAGCAGACATTACAAAATTAAACAGAAAATAGAAGACTTTGAATTTCAAACTTTCGATTTTCTGGTAATTGCTAATGCTACTGAAAACTTTTCAACCAAGAACAAGCTTGGTGAAGGTGGCTTTGGACCAGTATACAAGGGCATACTGACAGATGGACAAGAGTTAGCAGTGAAAAGACTCTCAGAGAATTCCGGACAAGGGTTAGAAGAGTTCAAAAATGAAGTGGCGTTGATTGCAAAACTTCAGCATCGTAACCTTGTAAAGCTCCTGGGTTGTTGCATTGAAGGAGAAGAAAAAATGTTAATTTATGAATACATGGCAAACAAAAGCTTGGACTTCTTTGTTTTTGATGAAGCCAAAAGGAAGTTGCTAGATTGGCCCATGCGATTCAAGATTATCACTGGCATTGCTCGAGGACTTTTGTATCTCCATCAAGATTCTAGACTAAGGATTATTCACAGAGATCTAAAAACTAGCAATATTTTGTTAGACACAAATTTGGATCCCAAAATAGCAGACTTTGGCTTGGCTCGATCATTTTTGGGAGATCAAGTTGAGGGAAAGACACATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTGCACGTGGACATTTTTCAGTGAAATCAGATGTTTTTAGTTATGGTGTGATAGTACTAGAGATAGTAAGTGGGAAGAAAAACAGGGAATTTTTAGACCCAGAAAACAACAATAATCTTCTTGGTCATGCATGGAGATTATGGACTGAAGAACGGGGACTTGAACTGCTAGATGAATTGATAGGACAACAATGCCTACCATCTGAAGTCACAAGATGCATACAGGTAGGCCTGTTGTGTGTGCAGCAAAGATCAAAAGATAGGCCAGACATGTCATCAGTGGTTCTGATGTTGAATGGTGAAAAATTATTACCAAAGCCAAAGGTTCCTGGCTTTTACATTGAATCAGATGTTACAAAAGAAACAAATTCTTCGACCGAAGATCACACACTATTCTCAGTTAATGAACTTTCCATCACAATGATAGATGCAAGGTAG 2382 0.3938 MSTTSSSLESLAVNQTIQDGKNETLVSAGNSARRYLGIWYINVSPFTVIWVANRNTPLENNSGVLKLNQKGILVLLNGTNNIIWSSPNRSSNTVNDPIARLLDSGNFLMRNGGETNEESALWQSFDYPGDTHMPEMKIGWNLETGVERYIASWKSDEDPAEGEYVVKVDRRGYPQIMKFKGAEIKSRVGSWNGFSLVGNPIPARGTSARFVFNEKELYFWYTLIDGLEFFVFTLTPSGTGQSWFWTTETRTRQVISSGEQDQCENYAFCGANSVCIYDGNYPVCECLRGYVPKTLDQWNISIWQNGCVPRDKSNCTNRYTDGFLKYTHMKLPDTSSSWFDATMNLDECMKLCIENCSCTACANLDVRDEGSGCLLWFNNLVDMRNFSQWGQDFYIRVPASELDHDGNGNITIKIVAITVGVIIFGLVTCACIFGRKNPGIARKIYSRHYKIKQKIEDFEFQTFDFLVIANATENFSTKNKLGEGGFGPVYKGILTDGQELAVKRLSENSGQGLEEFKNEVALIAKLQHRNLVKLLGCCIEGEEKMLIYEYMANKSLDFFVFDEAKRKLLDWPMRFKIITGIARGLLYLHQDSRLRIIHRDLKTSNILLDTNLDPKIADFGLARSFLGDQVEGKTHRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIVSGKKNREFLDPENNNNLLGHAWRLWTEERGLELLDELIGQQCLPSEVTRCIQVGLLCVQQRSKDRPDMSSVVLMLNGEKLLPKPKVPGFYIESDVTKETNSSTEDHTLFSVNELSITMIDAR* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1620 793 ProSiteProfiles Protein kinase domain profile. 475 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1620 793 Gene3D Transferase(Phosphotransferase) domain 1 551 753 - -
Pvu11g1620 793 SMART ntp_6 318 397 IPR003609 -
Pvu11g1620 793 ProSiteProfiles EGF-like domain profile. 259 296 IPR000742 -
Pvu11g1620 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 48 159 IPR036426 -
Pvu11g1620 793 Pfam Protein tyrosine and serine/threonine kinase 477 743 IPR001245 GO:0004672|GO:0006468
Pvu11g1620 793 CDD B_lectin 20 128 IPR001480 -
Pvu11g1620 793 SMART blect_4 2 128 IPR001480 -
Pvu11g1620 793 Gene3D - 3 125 IPR036426 -
Pvu11g1620 793 CDD STKc_IRAK 481 748 - -
Pvu11g1620 793 ProSiteProfiles PAN/Apple domain profile. 315 398 IPR003609 -
Pvu11g1620 793 PIRSF SRK 7 793 IPR024171 GO:0004674
Pvu11g1620 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Pvu11g1620 793 Gene3D Hepatocyte Growth Factor 314 394 - -
Pvu11g1620 793 SMART serkin_6 475 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1620 793 Pfam S-locus glycoprotein domain 187 293 IPR000858 GO:0048544
Pvu11g1620 793 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 791 - -
Pvu11g1620 793 Pfam D-mannose binding lectin 47 154 IPR001480 -
Pvu11g1620 793 ProSiteProfiles Bulb-type lectin domain profile. 2 122 IPR001480 -
Pvu11g1620 793 Pfam Domain of unknown function (DUF3403) 752 793 IPR021820 GO:0004674
Pvu11g1620 793 SUPERFAMILY Protein kinase-like (PK-like) 458 746 IPR011009 -
Pvu11g1620 793 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 791 - -
Pvu11g1620 793 CDD PAN_AP_plant 312 398 - -
Pvu11g1620 793 Pfam PAN-like domain 317 383 IPR003609 -
Pvu11g1620 793 Gene3D Phosphorylase Kinase; domain 1 438 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1620 Pvu-Chr11 41221588 41224573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1620 407 775 Receptor kinase-like Gene Family AT4G23190 51.337 9.71e-123 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1620 PK_Tyr_Ser-Thr 1.2e-46 CL0016