Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1611 ATGGTGTTATCGGCTTCGCCATGTTCCTTGACGAGAAGCTCACTGGAGGAGATGCTGGATTCACTTCGGCGGAGGGACGAGGAGGAGGAGAAGAAGAAGGACTTGCCACCGGCGTTGCCCGCCAGGCCGGCCTCGCGTGCAAGGCTTCCTCCGGCACGGCGGTTGCTGCCGAATGATTTTAAGGTTAGCGGCAGCGAGCGCCATGTCGTGCCGGAGAACGGAGTTTCTACTAATGAGGAGAGTGAGGTGAAGGAGAGTGATTTGGAGCAGGAGAGGAGAAGGTGTGGTTTTGGGAGCAAGAGGCTGAAGAAGGATGTGGATTCTCCTTATGTGACACTTTCTTCCAGTGATTCATCAGGGAAGGTTTGGGAATTGGAGGGTGGTGATAGCCTATCTTATTTCATCAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTGGGAATGATACAGTCAACTTCAGGAGAGGAAGCGTTCGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGACAGATCAGAGATTCTACCAGCAAATCCTGATGTTTTGGAAGATGTGGATGATCTAATTAAACTTGGTTATTTGAATGAGCCATCCGTTCTTCACAATCTTAAATTAAGATATTCTCAAGGGATGATTTATAGTAAAGCAGGTCCAGTTTTAATTGCACTCAATCCTTTCAAAGATCTTCAGATGAATGGAAATGATTATGTCTCAGCTCGTAGCCAGAGAGCTATGAATAGTCCTCATATTTACGCTATAGCAGATGCAGCTTATAACAAGATGATTAGAGATGAAGTCAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCACTGCAATACTTAGCTGCTCTTGGTGGTGGTGGTAATTGTGCCATAGAAAATGAATTTCTTCAGATAAATCGTATTCTAGAGGCTTTTGGGAATGCGAAAACATCTAGAAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTCACTTTGGCTGCACGGGAAAAATATGTGGGGCTAAAATTCAAACCTTATTGTTGGAAAAGTCCAGAGTTGTTCAACTGGCCCGTGATGAGAGATCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAAATTGAATCTTAGAGCAGTAAGTGAATATAAATATCTAGTTCAGAGTGATTGCATGTCAGTTGATGGTGTTGATGATGCCAAAAGCTTTGATCAGCTGATGGAAGCACTGGATACGGTTCGAATTTGTAAAGAGGATCAGGAGCTGATATTTAAGATACTTGCTGCAATACTATGGTTGGGAAATATATCATTCCAAGTAGACAGAGAAAATCACGTTGAGGTTGTTGAGGATGAAGCTGTAACCAGTGCTGCCAAGCTGATGGGTTGCACTTCCCAGGATTTAATGACAGCATTGTGTACACATAAGATCCAAGCTGATGAAGATATTATTGCCAAAAATTTGACGTTGAGTCAGGCAATTGAAAGAAGAGATGCAATTGCAAAATTTATCTATGCAAGCTTGTTTAACTGGCTCTTAGACCAAGTTAACAAGTCACTTGAAGTGGGTAAAACATGTACTGGGAAATCCATAAGTATCCTCGATCTTTATGGGTTTCAGACTTTCCAGAAGAACGGCTTTGAGCAGTTTTACATGAATTATGCCAATGAAAGGATTCAACAACATTATAATCGTCACCTGTTTAAACTAGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCTCAAGGTCTACTCTCTTTGTTGGATGAGGAGTCAAATTTACCAAACGCTTCTGATTTAACATTTGCCAACAAACTTAAGCATCACTTGCACCCTAATCCTTGCTTCAAAGGGGAAAGAGGAAGAGCTTTCCGTGTTCGTCACTATGCAGGAGAGGTTCTGTATGATACAAATGGCTTTTTAGAAAAGAACAGAGACACGATGTCTTCTGATTGCATTCAGTTCCTGTCATCATGTAATTGTGAACTGCTGCAGCTGTTCTCCAAAATGTTTAACCAGTCTGAAAAGCAGAGTGTTGCAACAAAATTCAAGGTTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCATGCCTCACTTTATTCGCTGCATAGCACCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAAGCCTTGTCCTACAACAGCTCAGGTGTTGTGGAGTTCCAGAAGTTGTTAGACTTTCAAGGGCTGGTTATCCTACTCGAATGACCCATCAAGAGTTTTCTAGAAGGTATGCGTTTATGCTTTCTGAGACCAACGTATCGAATGATCCATTGAGCATCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGACGCACTGGAGAATACGAGAAAACAGATTTTGCAGGGAATACTAGGGATTCAAAAATGTTTCCGTGGTCATCAAGCACGTGGTTGCTTCTGTGAACTTAAGAATGGAGTGACAACACTACAATCATTTATTCGTGGAGAAAATTCAAGAAGGAAATATGGTGTCACGGCGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGATGCTAGTCATGTAAATAGGTCAAAGAAATATCCTGAAAATGCCAAACCTAGGCGGAAGTCCTTTATGAAGATAATACCAGAAGTACAGGATTTGTCGAAAGAGCCAGTTCAGAATCTGCTTTCAGCTTTAGCAGAACTCCAAAGACAGGTTGACAAGGCTGATGCAATTGTAGAGCAAAAGGAAGAGGAATATATTGAGTTGAGGGAACAGATGAAACAATCTGAGAGAAAGAGGATTGAATATGAGACAAAAATGAAGTCAATGGAGGAGGCTTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTCCTGAGAATGCTACTGTTCAACCTGTAAGACATGATTTTGTGTTACCTCGTGGTTATGATTCTGAAGATACGTCCATGGGATCTCGAACTCCTGGTGAGAGCACACCAATGCTTTCTTTATCTATCCCTGATGCGGGGAGACAGGTCAATGGCACTTTAAATACTGTCAGCAATCTGATGAAGGAATTTGAGCAGCGAACACATATCTTTGATGATGAAGTAAAATCTTTGAACGATGTTAAACCGGGGCAGTGTGCAAACATAAATTCCGTTGAAGAACTTCGGAAACTTAAACAGAGATTTGAAGGGTGGAAGAAACAATACAAGATCAGATTACGTGAGACTAAGACAAGGCTTCATAAATCAGAATCAGAGAAAAGTTGGCGAGCATGGTGGGGGAAGTTAGGCTCAAGAGCATAA 3531 0.4135 MVLSASPCSLTRSSLEEMLDSLRRRDEEEEKKKDLPPALPARPASRARLPPARRLLPNDFKVSGSERHVVPENGVSTNEESEVKESDLEQERRRCGFGSKRLKKDVDSPYVTLSSSDSSGKVWELEGGDSLSYFIKKKLRVWCRQPRGQWELGMIQSTSGEEAFVSLSNGNVMKVDRSEILPANPDVLEDVDDLIKLGYLNEPSVLHNLKLRYSQGMIYSKAGPVLIALNPFKDLQMNGNDYVSARSQRAMNSPHIYAIADAAYNKMIRDEVNQSIIISGESGSGKTETAKIALQYLAALGGGGNCAIENEFLQINRILEAFGNAKTSRNNNSSRFGKLIEIHFGCTGKICGAKIQTLLLEKSRVVQLARDERSYHIFYQLCAGSSSDLKEKLNLRAVSEYKYLVQSDCMSVDGVDDAKSFDQLMEALDTVRICKEDQELIFKILAAILWLGNISFQVDRENHVEVVEDEAVTSAAKLMGCTSQDLMTALCTHKIQADEDIIAKNLTLSQAIERRDAIAKFIYASLFNWLLDQVNKSLEVGKTCTGKSISILDLYGFQTFQKNGFEQFYMNYANERIQQHYNRHLFKLEQEDYELDGIDWTKVDFEDNQGCLDLFEKKPQGLLSLLDEESNLPNASDLTFANKLKHHLHPNPCFKGERGRAFRVRHYAGEVLYDTNGFLEKNRDTMSSDCIQFLSSCNCELLQLFSKMFNQSEKQSVATKFKVQLFKLMHQLESTMPHFIRCIAPNTKQLPGIYDESLVLQQLRCCGVPEVVRLSRAGYPTRMTHQEFSRRYAFMLSETNVSNDPLSISVAVLQKFNIPSEMYHVGYTKLYLRAGQIDALENTRKQILQGILGIQKCFRGHQARGCFCELKNGVTTLQSFIRGENSRRKYGVTAKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDASHVNRSKKYPENAKPRRKSFMKIIPEVQDLSKEPVQNLLSALAELQRQVDKADAIVEQKEEEYIELREQMKQSERKRIEYETKMKSMEEAWQKQMASLQMSLVAARKSLAPENATVQPVRHDFVLPRGYDSEDTSMGSRTPGESTPMLSLSIPDAGRQVNGTLNTVSNLMKEFEQRTHIFDDEVKSLNDVKPGQCANINSVEELRKLKQRFEGWKKQYKIRLRETKTRLHKSESEKSWRAWWGKLGSRA* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1611 1176 PRINTS Myosin heavy chain signature 219 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 PRINTS Myosin heavy chain signature 273 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 PRINTS Myosin heavy chain signature 317 344 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 PRINTS Myosin heavy chain signature 548 576 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 PRINTS Myosin heavy chain signature 601 629 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 PANTHER MYOSIN-2 ISOFORM X1 121 1175 - -
Pvu11g1611 1176 MobiDBLite consensus disorder prediction 14 90 - -
Pvu11g1611 1176 SMART MYSc_2a 183 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 Gene3D - 851 896 - -
Pvu11g1611 1176 ProSiteProfiles IQ motif profile. 907 935 IPR000048 GO:0005515
Pvu11g1611 1176 ProSiteProfiles IQ motif profile. 870 899 IPR000048 GO:0005515
Pvu11g1611 1176 Gene3D - 560 735 - -
Pvu11g1611 1176 Coils Coil 1142 1162 - -
Pvu11g1611 1176 SMART iq_5 846 868 IPR000048 GO:0005515
Pvu11g1611 1176 SMART iq_5 869 891 IPR000048 GO:0005515
Pvu11g1611 1176 SMART iq_5 906 928 IPR000048 GO:0005515
Pvu11g1611 1176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 927 IPR027417 -
Pvu11g1611 1176 Pfam Myosin head (motor domain) 191 833 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 MobiDBLite consensus disorder prediction 17 37 - -
Pvu11g1611 1176 Coils Coil 962 1017 - -
Pvu11g1611 1176 Gene3D - 779 846 - -
Pvu11g1611 1176 ProSiteProfiles IQ motif profile. 849 876 IPR000048 GO:0005515
Pvu11g1611 1176 Gene3D - 373 429 - -
Pvu11g1611 1176 Gene3D Kinesin motor domain 188 778 IPR036961 -
Pvu11g1611 1176 Coils Coil 12 32 - -
Pvu11g1611 1176 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 Pfam IQ calmodulin-binding motif 909 925 IPR000048 GO:0005515
Pvu11g1611 1176 Pfam IQ calmodulin-binding motif 874 890 IPR000048 GO:0005515
Pvu11g1611 1176 CDD MYSc_Myo8 203 833 IPR036022 -
Pvu11g1611 1176 Gene3D Myosin VI head, motor domain, U50 subdomain 430 537 - -
Pvu11g1611 1176 MobiDBLite consensus disorder prediction 1053 1072 - -
Pvu11g1611 1176 ProSiteProfiles Myosin motor domain profile. 189 845 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu11g1611 1176 PANTHER MYOSIN 121 1175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1611 Pvu-Chr11 41014856 41029550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1611 1 1173 Myosins gene family AT5G54280 57.213 0.0 1383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1611 11 41014856 41029550 Pvu11g1611 11 41014856 41029550 ECH
Pvu5g0889 5 22280293 22290404 Pvu11g1611 11 41014856 41029550 PCT