Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0665 ATGGTTTTCTCCTCTATTCCAGTCTTTGTAGATCCTCCCAATTGGCAGCAGCAACAGAACCATCCTCAAGCCAATGGCAGTGATAACACTCAGCTTCTTCCACCTTTGCCACCACAGCAGACTCATGTGGGAGGTTCCGTGGGATCAATCAGACCAGGTTCTATGGCTGATCGAGCTAGGCTAGCTAAGATACCTCCTCCTGAAGCAGCTCTCAAGTGTCCACGTTGTGAATCCACCAACACTAAATTTTGCTATTTCAACAACTATAGCCTCTCTCAACCACGCCACTTCTGCAAGACTTGTAGGCGTTATTGGACAAGAGGGGGTGCTCTAAGAAACGTTCCTGTGGGTGGAGGCTGCCGTAGGAACAAGAAGAACAAAAGGAGTCGCTCTAAGTCTCCGGCATCATCTGAGAAACAAACACTCTCTGCTTCTTCTGGTGCACTCCCTTCTGCTGGAAACACTCACGAGCTTATAAACCAGTTGCCACAACCACCGAACCTTCCCTTCATGGCATCCCTCCAGAACCTCAACCTCAACCGTTATGCTGTTGGAAACATGGGTCTCGGCTTGCGTGAGATTCACGGACAGAACGATCACATGGGGTTTCAAATTGGTGGCAGTGGTAATTCCTCTGCTGGTGGAGGAATGGATCAGTGGCGCTTGCAGCAGATTCCTTTCTTGAATGGTTTTGAATCAGCTTCAGCTGGTTCATACCATTTTCAAAACGAAAGTATTGAAACACCTTCTGGGTTGGTTGGAGATTTAGCAACGAATTCTAGGGTTTCTCAGATTCCATCGGTTAAAATGGAAGAAAGTGGAGCTTTAAATTTGTCAAGAACACCACTGAACGTCTCAGAAAATAACCACTACTATTCATGGACTGATATGTCAGGTCTTTCCTCTTCTTCTGCTAGTCATCTCTTGTAA 930 0.4656 MVFSSIPVFVDPPNWQQQQNHPQANGSDNTQLLPPLPPQQTHVGGSVGSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPASSEKQTLSASSGALPSAGNTHELINQLPQPPNLPFMASLQNLNLNRYAVGNMGLGLREIHGQNDHMGFQIGGSGNSSAGGGMDQWRLQQIPFLNGFESASAGSYHFQNESIETPSGLVGDLATNSRVSQIPSVKMEESGALNLSRTPLNVSENNHYYSWTDMSGLSSSSASHLL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0665 309 MobiDBLite consensus disorder prediction 115 161 - -
Pvu11g0665 309 Pfam Dof domain, zinc finger 70 125 IPR003851 GO:0003677|GO:0006355
Pvu11g0665 309 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Pvu11g0665 309 MobiDBLite consensus disorder prediction 11 47 - -
Pvu11g0665 309 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
Pvu11g0665 309 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 306 IPR045174 GO:0003700|GO:0006355
Pvu11g0665 309 MobiDBLite consensus disorder prediction 11 53 - -
Pvu11g0665 309 MobiDBLite consensus disorder prediction 135 161 - -
Pvu11g0665 309 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 9 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0665 Pvu-Chr11 5628982 5631847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0665 38 308 C2C2-Dof Transcription Factor Family AT3G55370 42.857 5.28e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pvu11g0665 zf-Dof 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0665 - - gmx:100816635 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1478 5 37185922 37187662 Pvu11g0665 11 5628982 5631847 PCT