Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0650 ATGGATCCACGTTTCAAGTCCAATTTCATCAATGGTTTTGAACCTAACCAAGTGCCCAACACGGTTGTTGTAGAGGATCAGTTCCTTGTCCCTGTTAATGGGATGATGAGATCCTTTGAGTTTGGATTCAGGGATAACCCATTAGTTCTTCCACCTGATCCAAACGTTGCTCAGAACCATGTTTCCTTTGCCACCGATGAGGAGTCTCCATTGGATGAGATTGATTTTTCAGTTACTGTTCTACGCTACATAAACCAAATGCTCATGGAAGAGGACTTGGAGGAAAAGTCGTGTATGTTTCATGATTCCTTGGCTCTCCAAGCTGCTGAGAAATCATTCTATGAGGTCATTGGTGAGACACACCCTTCTTCAATAAAAACCTATCACGACGTGGACAGCCCTGAGGATAGTAGTTTCAGTGATTATGGCAGCGGTGGTACAGCCACTAGCACTGGTAACTCGATTGAGTCTCATGGCAATAACGTTGATCTTACTGACTATAAGCCTTCCATACCGCAAACCACTTTTCCCACTGACTTTGTTTTCCAGGCCAGTTCAATCCATTCTTATATGAACACCACAAGAAACTTCGGTGTTACCGATAGTGGATTCTTGGCAAGTTCCACTGCAGCTGGATTTTTGGATCCAACCTTGTTTAGCAAGAGTGAGTCTGTACTGCAATTTGAGAGGGGTGTGGAGGAAGCCAATAAGTTCCTACCTAAAGGGAATCCTTTGGTTATTGACTTGGATAACCCCTCTTTTAGGAAGGTTCCTCCTCTACAGGAGGAAACTAAGGTAGAGAGAGATGAAATTTATGCTGAGTCTAGGGGAAGGAAGAATCACGAGCGGGAAGATGAAGAAGCAGATTTGCATGATGGGAGAAGCAACAAGCAGTCTGCTGTGTACATTGATGACAGTGAGATATCAGAATTGCTTGATAAGGTTCTGCTGGGCACTAGATGCAGAAATGATCCAGCTCCTTTGTGTATTTGTTACGCAGACCTTTCTAATGGAGCATCCTTGTGTGCACAGAAGAAATTAGAAGAAACAAACAAGTCTGGTGGTGGGAAGAGCCGTGTTAAGAAACAGGGCAACAAAAAAGAAGTTGTGGATCTGAGGACATTGTTGCTTCTATGTGCACAAGCTGTTTCTTCTGATGATCGTGTATCTGCTAATGAATTACTTAAGCAGATAAGGCAACATACTTCTCCGCTGGGTGATGGGACTCAGAGACTGGCCCATTGCTTTGCAAATGCCCTTGAAGCACGCTTGGCTGGGACAGGCACTCAGATTTATACTGCTTTATCACACAAAAGAACCTCTGCAGCAGACATGGTGAAAGCTTACCAAATGTATATTTCGGCCTGTCCATTCAAGAAGCTATCAATAATTTTTGCAAACCATACAATTTTGCAGCTAGCCATGGAAGTCGAATCTCTTCATATTATAGACTTTGGCATCCGTTATGGCTTCCAGTGGCCAGCTCTTATATATCGTCTATCAAAACGACTTGGTGGGCCTCCCAAGCTGCGGATTACCGGGATAGAACTCCCACAACCTGGTTTCAGGCCAGCAGAGAGAGTCCAGCAGACGGGGCTTCGCCTAGCAAGATATTGTGATCGCTTTAAAGTTCCATTCGAGTTCAATGCAATTGCACAGAAATGGGAAACCATCAAAATTGAGGACTTGAAGATAAAGGAAAATGAACTTCTTGCAGTGAATTCTATGTTTAGATTTCAAAATCTACTTGATGAGACAATTGTGTTGAACAGTCCCCGGGATGCTGTTTTAAATTTAATAAGAAAGGCAAATCCCACTATCTTTATACATGGTACTGTCAATGGGAGCTACAATGCTCCATTCTTTGTACCACGGTTCCGGGAGGCCCTTTTCCATTATTCTACTTTGTTTGATGTGCTTGATACTAATGTCAGTCGTGAAGATCCAATGAGATTGATGTTTGAGAAAGAGTTCTTTGGGCGGCGGGTAATGAATGCTTTAGCTTGTGAGGGTTGTGAGAGGGTTGAGAGGCCCGAGATATACAAGCAATGGCAGGTTAGAAACATGAGAGCTGGATTTAGGCAACTTCCCTTGGATAAACATCTCATCAACAAATTAAGATACAAGTTGAAAGATGTGTACCACAGTGATTTCATGCTTCTTGAAGATGCCAACTTCATGCTGCAAGGTTGGAAGGGCCGAGTAGTTTATGCTTCCTCTTGTTGGGTACCTGCACAATGA 2241 0.4328 MDPRFKSNFINGFEPNQVPNTVVVEDQFLVPVNGMMRSFEFGFRDNPLVLPPDPNVAQNHVSFATDEESPLDEIDFSVTVLRYINQMLMEEDLEEKSCMFHDSLALQAAEKSFYEVIGETHPSSIKTYHDVDSPEDSSFSDYGSGGTATSTGNSIESHGNNVDLTDYKPSIPQTTFPTDFVFQASSIHSYMNTTRNFGVTDSGFLASSTAAGFLDPTLFSKSESVLQFERGVEEANKFLPKGNPLVIDLDNPSFRKVPPLQEETKVERDEIYAESRGRKNHEREDEEADLHDGRSNKQSAVYIDDSEISELLDKVLLGTRCRNDPAPLCICYADLSNGASLCAQKKLEETNKSGGGKSRVKKQGNKKEVVDLRTLLLLCAQAVSSDDRVSANELLKQIRQHTSPLGDGTQRLAHCFANALEARLAGTGTQIYTALSHKRTSAADMVKAYQMYISACPFKKLSIIFANHTILQLAMEVESLHIIDFGIRYGFQWPALIYRLSKRLGGPPKLRITGIELPQPGFRPAERVQQTGLRLARYCDRFKVPFEFNAIAQKWETIKIEDLKIKENELLAVNSMFRFQNLLDETIVLNSPRDAVLNLIRKANPTIFIHGTVNGSYNAPFFVPRFREALFHYSTLFDVLDTNVSREDPMRLMFEKEFFGRRVMNALACEGCERVERPEIYKQWQVRNMRAGFRQLPLDKHLINKLRYKLKDVYHSDFMLLEDANFMLQGWKGRVVYASSCWVPAQ* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0650 746 PANTHER SCARECROW-LIKE PROTEIN 14 47 744 - -
Pvu11g0650 746 MobiDBLite consensus disorder prediction 259 296 - -
Pvu11g0650 746 MobiDBLite consensus disorder prediction 137 157 - -
Pvu11g0650 746 Pfam GRAS domain family 372 742 IPR005202 -
Pvu11g0650 746 MobiDBLite consensus disorder prediction 260 294 - -
Pvu11g0650 746 ProSiteProfiles GRAS family profile. 363 743 IPR005202 -
Pvu11g0650 746 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 744 IPR005202 -
Pvu11g0650 746 MobiDBLite consensus disorder prediction 129 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0650 Pvu-Chr11 5483354 5486607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0650 80 745 GRAS Transcription Factor Family AT1G07530 53.090 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu11g0650 GRAS 8.5e-112 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0650 11 5483354 5486607 Pvu11g0650 11 5483354 5486607 ECH
Pvu1g2383 1 49176444 49179604 Pvu11g0650 11 5483354 5486607 ECH
Pvu5g1497 5 37349336 37351708 Pvu11g0650 11 5483354 5486607 PCT