Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0604 ATGAGTTGGAACCCACACATGGATGTCCATTACAATAGCATTAGCTATCCCTATAATACAGCAGGAAGCTTTATCGAATATTTTGAAGGTCTTACCTATGAACATGTCAACTTCATTTTTTCTGGTGCATCACATGCTCAGGAGAGTTCATACCCTTCAAATTCAAGCTTTTACAAGTTTGGACTATCTGAACCTGATAATTCATCGTACTATCGTTACAGTCATGGTTATGAGGTAAATCATCACGAACCACTGGTGGATGAGTATAGGAGACCTTCAGAGAACTCATTGACAATGAATGAACAGACAGCAGCAGTAAGCACAGAATGGGTTGAAGGCGGAAACACTGACACACGAGACAATTCTATTGAATGTCCTCGAAGACATCATAGTAATTCAAGCGATTATCAGGTCATTTGGCAAGACAATATTGATCCCGACAACATGACCTATGAGGAACTACTTGAATTAGGTGAAGCTGTTGGAACTCAGAGCCGCGGTCTCACCCATGAACAGATCTCCTCACTCCCAGTGTCGAAGTTCAAATGTGGGTTCTTCTTGAGGAAGAAGTCACGGGGTGAGAGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAGCGTATCACCTTGCCATGTAAACATCTTTATCATGCTAGTTGTGGTAACAGGTGGCTTAGCATCAATAAGGCATGCCCAATATGTTACACAGAAGTGTTTGCCGACAAGTCAAAGCACAAATAA 747 0.4177 MSWNPHMDVHYNSISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESSYPSNSSFYKFGLSEPDNSSYYRYSHGYEVNHHEPLVDEYRRPSENSLTMNEQTAAVSTEWVEGGNTDTRDNSIECPRRHHSNSSDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTHEQISSLPVSKFKCGFFLRKKSRGERCVICQMEYKRGDKRITLPCKHLYHASCGNRWLSINKACPICYTEVFADKSKHK* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0604 248 MobiDBLite consensus disorder prediction 101 120 - -
Pvu11g0604 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 242 IPR013083 -
Pvu11g0604 248 ProSiteProfiles Zinc finger RING-type profile. 196 236 IPR001841 -
Pvu11g0604 248 Pfam Ring finger domain 195 236 IPR001841 -
Pvu11g0604 248 SMART ring_2 196 236 IPR001841 -
Pvu11g0604 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 246 - -
Pvu11g0604 248 MobiDBLite consensus disorder prediction 101 129 - -
Pvu11g0604 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 246 IPR033276 GO:0004842|GO:0016567|GO:0046621
Pvu11g0604 248 SUPERFAMILY RING/U-box 195 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0604 Pvu-Chr11 5096103 5100848 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1529 5 37581715 37586245 Pvu11g0604 11 5096103 5100848 PCT