Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1682 ATGGATAACAGAGACGAAGTACTTGGTGGACTTTTAACACTGGGATTTGATGAAGCATCTTGCATAAGCAGGGTGCACTCTCACTTGTACCGCAAAGTTTCACCTCACAGACCTTCTCCATATTTGATATCTAAACTACGTAACTACGAACAAATTCATGCAAGCTGTGGACCTAACACAAGAACTTATCACAGAAACATGAGAAAGATTCAACTCTCCAAGGACAATAATGCCACTGCTACAACGTGTAACTACCTCATTTGGACACCTGTTAATGGCTTGGGAAACCAAATCATTAGCATTGCTGCAACTTTTCTTTATGCCATTCTCACTGATCGAGTTCTGCTTCTCAAATTTGGGAAAGACAAGCTTGCACTGTTCTGTGAGCCCTTTCTCAATTCAACTTGGATATTACCTCACAACTCTCCTTTCTGGAAAGAAATTTATATTCAAACGTATCAGATCGAGAAGGATAATGCCAGCAATTCAAAATCAGTTCTGTTTATCAATCTGCAACACTCCCACTCCGACAGCAGCCATAAGGAAAAATTTCACTGTGACCATCTTCAAAATCTTATCCGTAAGACTCCTCTGCTGATCTTGAGGTCTGATCAATACTTTGTTCCTTCTCTATTCATGAACCCACTTTTCAACTTAGAGATAAACAAAATGTTCCCAGAGAAAGACACGGTTTTTCACCATCTGGGTCGCTACCTTTTTCACCCTTCAAATGAGGCATGGGAACTGATCACCAATTACTATCAAGCACACTTGGCCAAAGCAGATGAACTGATAGGCTTGCAGATAAGAGTATTCAATGCTGTTTCCACTCCACAACAGGCAATTATGGACTTGGTTTTGAGCTGCACATTGAATCATAAGATACTACCAAAAGTGGATTTGCAAACTTCAACTTCCTCTGTTGGAAAAAATGGAAGTGTAAAAGCAGTTCTTGTGGCATCTTTGTATGAAGAGTATGGAGACAGTTTAAGGAGGATGTATCAAAAGAAACCAAAGGGTAGTGGGGAATCCATAGAAGTTTATCAGCCAAGTCATGAAAGAAAGCAAATTTTTAATGATGGTAAGCATAATTTAAAAGCTTGGATGGAGATGTATCTGCTGAGTTTATCTGATGTGTTGGTCACTACCTCTCTCTCCACTTTTGGCTATGTTGCTCAAGGTTTGGGAAATCTAAAGCCATGGCTTCTTTACAGGATAGTGAGGAATGAGACCCATTTCCCAGCCTGTGAACAAGATTTCTCAATGGAACCTTGCTATCATGATCCTCCCAAACATTACTGTGAAGGAAAGCCATTGAAAGATTTTGCTTCTTCTTTTCCAAGTTTGAAGGAATGCAAGGATTTTAGTTTTGGTGTGAAGCTGGTTGATGACAGAACAAAACTGTGA 1407 0.398 MDNRDEVLGGLLTLGFDEASCISRVHSHLYRKVSPHRPSPYLISKLRNYEQIHASCGPNTRTYHRNMRKIQLSKDNNATATTCNYLIWTPVNGLGNQIISIAATFLYAILTDRVLLLKFGKDKLALFCEPFLNSTWILPHNSPFWKEIYIQTYQIEKDNASNSKSVLFINLQHSHSDSSHKEKFHCDHLQNLIRKTPLLILRSDQYFVPSLFMNPLFNLEINKMFPEKDTVFHHLGRYLFHPSNEAWELITNYYQAHLAKADELIGLQIRVFNAVSTPQQAIMDLVLSCTLNHKILPKVDLQTSTSSVGKNGSVKAVLVASLYEEYGDSLRRMYQKKPKGSGESIEVYQPSHERKQIFNDGKHNLKAWMEMYLLSLSDVLVTTSLSTFGYVAQGLGNLKPWLLYRIVRNETHFPACEQDFSMEPCYHDPPKHYCEGKPLKDFASSFPSLKECKDFSFGVKLVDDRTKL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1682 468 Gene3D - 80 133 - -
Pvu10g1682 468 Coils Coil 465 468 - -
Pvu10g1682 468 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 2 464 - -
Pvu10g1682 468 Pfam Xyloglucan fucosyltransferase 3 434 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pvu10g1682 468 PANTHER FUCOSYLTRANSFERASE 2-RELATED 2 464 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1682 Pvu-Chr10 42976286 42977692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1682 3 462 Xyloglucan Fucosyltransferase1 AT2G03220 47.872 3.25e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1682 K13681 - gmx:100818288 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1887 5 40389341 40392932 Pvu10g1682 10 42976286 42977692 PCT