Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1681 ATGGAAATCTTTGAAGCCAAACCCCAGAACACGAGGATCAGTTCCAACAGATTTTCAACACTCTTTCTTGTACTTTTCATATCATTTCCTGTTGCAGTCATAGTTTTTTCAATGTATCCAAACTCAACTTTGGCTGTTTTTGAGGGGTTTTCCAAAGCCAGGGAAGCAGAAAAACCAGATCAGAACGCCACAACCATTGTTTCTCAGTTGGGAGAAAGTGTCCACAACATATCAGAAGACAACATAAGACGTGTCGGTGGTGGTGGAGTTAAGGAGCTGCAAGGAAGATATAAAGAACATAGAGCTAATGAAGGAAGAACTATGAATATCACAGCAAAAGATGGTGGTTTGAAAAACGGTTCTTTGAAAAGTTTAAGAAATGAATCATTTCCACGTGATGATGTGGATAACAGAGACGAAGTACTTGGTGGACTTTTAACATTGGGATTTGATGAATCATCTTGCATAAGCAGGGTGCAATCTCACTTGTACCGCAAAGTTTCACCTCACAAACCTTCTTCATATTTGATATCTAAACTACGTAACTACGAACAAATTCATGCAAGCTGTGGACCTAACACAAGAACTTATCACAGAAACATGAGAAAGATTCAACTCTCCAAGGACAATAATGCCACTGCTACAACGTGTAACTACCTCATTTGGACACCTGTTAATGGCTTGGGAAACCAAATCATTAGCATTGCTGCAACTTTTCTTTATGCCATTCTCACTGATCGAGTTCTGCTTCTCAAATTTGGGAAAGACAAGCTTGCACTGTTCTGTGAGCCCTTTCTCAATTCAACTTGGATATTACCTCACAACTCTCCTTTCTGGAAAGAAATTTATATTCAAACGTATCAGATCGAGAAGGATAATGCCAGCAATTCAAAATCAGTTCTGTTTATCAATCTGCAACACTCCCACTCCGACAGCAGCCATAAGGAAAAATTTCACTGTGACCATCTTCAAAATCTTATCCGTAAGACTCCTCTGCTGATCTTGAGGTCTGATCAATACTTTGTTCCTTCTCTATTCATGAACCCACTTTTCAACTTAGAGATTAACAAAATGTTCCCAGAGAAAGACACGGTCTTTCACCATCTGGGTCGCTACCTTTTTCACCCTTCAAATGAGGCATGGGAACTGATCAGCAGTTACTATCAAGCACACTTGGCCAAAGCAGATGAACTGATAGGCTTGCAGATAAGAGTATTCAATGCTGTTTCCACTCCACAACAGGCAATTATGGACTTAGTTTTGAGCTGCATATTGAATCATAAGATACTACCAAAAGTGGATTTGCAAACTTCAACTTCCTCCGTTGGAAAAAATGGAAGTGTAAAAGCAGTTCTTGTGGCATCTTTGTATGAAGAGTATGGAGACAATTTAAGGAGGATGTATCAAAAGAAACCAAACTAG 1422 0.3938 MEIFEAKPQNTRISSNRFSTLFLVLFISFPVAVIVFSMYPNSTLAVFEGFSKAREAEKPDQNATTIVSQLGESVHNISEDNIRRVGGGGVKELQGRYKEHRANEGRTMNITAKDGGLKNGSLKSLRNESFPRDDVDNRDEVLGGLLTLGFDESSCISRVQSHLYRKVSPHKPSSYLISKLRNYEQIHASCGPNTRTYHRNMRKIQLSKDNNATATTCNYLIWTPVNGLGNQIISIAATFLYAILTDRVLLLKFGKDKLALFCEPFLNSTWILPHNSPFWKEIYIQTYQIEKDNASNSKSVLFINLQHSHSDSSHKEKFHCDHLQNLIRKTPLLILRSDQYFVPSLFMNPLFNLEINKMFPEKDTVFHHLGRYLFHPSNEAWELISSYYQAHLAKADELIGLQIRVFNAVSTPQQAIMDLVLSCILNHKILPKVDLQTSTSSVGKNGSVKAVLVASLYEEYGDNLRRMYQKKPN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1681 473 Gene3D - 214 267 - -
Pvu10g1681 473 PANTHER FUCOSYLTRANSFERASE 2-RELATED 15 472 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pvu10g1681 473 Pfam Xyloglucan fucosyltransferase 131 471 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pvu10g1681 473 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 15 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1681 Pvu-Chr10 42969163 42972472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1681 130 473 Xyloglucan Fucosyltransferase1 AT2G03220 46.610 5.36e-107 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1681 K13681 - gmx:100809919 578.17