Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02508 ATGGTTCTCTCGAAAACCGCCTCCCAGACAGACGTCTCTGTCCATTCAACCTTCGCCTCTCGCTATGTCCGCGCCTCCCTTCCCAGGTTCAAGATGCCGGAGCAATCGATCCCGAAGGAAGCGGCGTACCAGATCATAAACGACGAGCTGATGCTAGACGGCAATCCTCGGCTGAACCTGGCGTCGTTTGTGACGACCTGGATGGAGCCTGAATGCGACAAACTCATCATGGCTGCCATTAACAAAAACTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGAACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTCGAAGAGTCAGAAACTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATAATGTTGGCTGGGTTGGCATTCAAAAGGAGATGGCAGAATAGAAGGAAAGAGGAAGGGAAGCCTTATGACAATCCCAACATTGTAACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAAGAGGTGAAGCTGCGTGATGGATACTTTGTAATGGACCCTGAAAAGGCAGTGGAAATGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACTCTGAATGGAGAGTTTGAAGATGTCAAACTCTTAAATGATCTCCTGGTGGAAAAGAATAAGGAAACTGGATGGGACACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCGCCCTTTCTTTATCCAGAGCTTGAATGGGACTTTCGGTTGCCACTAGTGAAGAGCATAAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGAATTGGTTGGGTCATCTGGAGAAACAAGGAAGACCTTCCTGAAGAACTCATTTTCCACATTAACTATCTAGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTAATTCGATTGGGTTTTGAGGGATACAAAATGGTGATGGAAAACTGCAGAGACAACATGACAGTGCTTAAGGAAGGACTGGAGAAAACAGGACGGTTTGACATTGTATCCAAAGACATTGGAGTCCCATTGGTGGCCTTCACTTTGAAGGACCACACCCACTTCAATGAGTTCCAAATCTCAGACATGCTGAGGCGCTATGGTTGGATAGTGCCAGCATACACCATGCCCCCAGATGCACAACATGTAACAGTGCTTCGTGTTGTGGTTAGGGAGGACTTTTCTCGCACCCTTGCGGAGCGTCTTGTGATTGATGTCTCCAAAGTGGTGCACGAGCTGGATCTGCTTCCTGCTAGGGTGATCAGCACCAACACCATAGCGGTTACTGGAGAAGAAGGTGAAGACAATGAAAAGGTGCTGTTTGCCAAGAAGAGTGAAATAGAGACGCAAAGGGAAATCACTTCAGCTTGGAAGAAGTTTGTGATGCAGAGGAAGAAGATGAATGGAGTTTGTTAA 1509 0.4732 MVLSKTASQTDVSVHSTFASRYVRASLPRFKMPEQSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKRRWQNRRKEEGKPYDNPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYKMVMENCRDNMTVLKEGLEKTGRFDIVSKDIGVPLVAFTLKDHTHFNEFQISDMLRRYGWIVPAYTMPPDAQHVTVLRVVVREDFSRTLAERLVIDVSKVVHELDLLPARVISTNTIAVTGEEGEDNEKVLFAKKSEIETQREITSAWKKFVMQRKKMNGVC 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02508 502 Gene3D - 66 360 IPR015421 GO:0003824
Pumo9g02508 502 FunFam Glutamate decarboxylase 1 65 - -
Pumo9g02508 502 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pumo9g02508 502 FunFam Glutamate decarboxylase 66 360 - -
Pumo9g02508 502 FunFam Glutamate decarboxylase 361 448 - -
Pumo9g02508 502 Gene3D - 1 65 - -
Pumo9g02508 502 PANTHER GLUTAMATE DECARBOXYLASE 1 502 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pumo9g02508 502 Gene3D - 361 448 - -
Pumo9g02508 502 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Pumo9g02508 502 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02508 Pumo-Chr9 59777460 59784073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02508 1 502 Calmodulin-binding Proteins AT5G17330 84.462 0.0 897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02508 9 59777460 59784073 Pumo9g02508 9 59777460 59784073 ECH