Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00349 ATGTCCTATAAACCGTGTGTTTCAACAAAGAGGAATAAGGACACCGGCTTTGCATATTCTAAGTTGCCCAGTTGTCGTTTTGTTTGTTTCCCACGATCAAATGCCATATGTCTCCTTGTTCACATCGACGCCTACCTTTTCCACCTCGTCCTCTTATGCCTCCGACAATACGCTCAATTTCTTTTGTCTCTCTCCTTTCACCCCCATCTCTTCATATATACTCATTCCCAACCTCAAACCACTCGAACCATTCATGCCCCCACAACAATGGCATCAAGCCCCGAAGACCCAACACTTCTCAAACTCGAGTCAGCATGTTCCGACCTGAAAGCCCTCCTCCGAGCCTCAGAGGAGACACAAGAAAACCTGGGAACCACAGAGACGAGGTTCGATCTCTTACAAGGATCACTGTCCACAGCGTCCAGAAGAATCGTCCCTTTACAATCCCTAGCCATGTCGAGAAAAGCACTCGACACCAGAATCACCAGAGCCATCTCCCCGGCACTTGCACTCCTCAACACGTTCAAGTTGACGGAGTCTCTCCAGAACAGTCTCGTCGAGCTTTCGACGAGGCTGTCCTCGGAGAAGCCGCATCAGAAGCGGCTCCAGAGGCTTCTGGAGTACACCGAGTGCGTGGATCAACTGAATGAGGGGATAAACAGCATATGCTCGGAGGTGGAGGTGGTGATCCAGAAGCTGCAGGAGGTGGTGGAGTTCATAAGCCGGACGAAGGCGGCGGATCAGTACAGGGACGCGAGGCTGAGAGAGGCGTTGGGGACTCTGAAGGGGCTGTATGAGATTGAGGTGGATGAGATGAGGTTCCAGGGGTTGCTGGACCAGGCCTTGGTGCATGTGCAGGATGAGTTTGAAGGGCTTTTGCTGAGGATGAAGCATAGGAACCTCGGGGATTTGGTGCACCAACATGGTGGTGACTTCAGGGAATTGGGGTCGTCGGAACTGGAAATTGAAGTCCTCAGACGAATTTCAACCACTCTTGCTGCCAACGATTGCCTAGACATATGCATTGATATATACGTCAAGGCGAGATATAGAAGGGCTGCAAAGGCACTAATGAGGCTAAACCCCGATTACCTGCGAACATACACCCCAGAAGGAATCGACGAAATGGAGTGGGAAAGCTTAGAGACAGCCATAACGCTTTGGATCCAACACTTCGAAGTTGCACTAAACAAAGTCCTCCTTTCAGAAAAGAAACTCTGCGAGAAGGTCTTGGGCGATTTCATGGATGGACTCATCTGGCCAGAATGCTTCATCAAGATCTCCGACAAGATCATGGCCGTCTTCTTCCGCTTCGGCGAAGGCGTGGCCCGAAGCAGCAAAGAGCCCCAGAAGCTCTTCAAACTCTTGGACATGTTCGAGTCCTTGGAGAAACTCAAACCCGAGATGTCACAGATATTTGAAGGTGAACCTGGCATGGACATTTGCACGCGGTTCCGCGAGTTGGAGAAACTCATCATCGATGCTTCGAGCAAAGTCTTCTGGGAATTCGGTCTCCAAATAGAAGGCAACATCGACGGTCTTCCACCGCCGCAAGACGGTTCCGTTCCAAAACTCGTGAGATACGCCATCAACTATCTCAAGTACCTCACAACGGTTAACTACAGAACATCCATGGTTAAGGTTCTTCGAACACAACAAACATGGAAGGGTAGTAGCAATGACATGTCCTCGGACGAGGGTTTGTTGAAGCTTGCAATTTCCAATGTCATGGAGGCGCTGCAACGGAACATTGAGGCAAAGCGCTTGTGTTGTAGGGACAAGATTTTGGTGCATGTTTTCACGATGAATACTTATTGGTACATTTATATGAGGACGAAGAACACGGAGCTTGGTGAGGTGTTGGGTGAGAAGTGTATGAAAGAAAGTTACAAGGCTGTGGCGGAGGAATCGGCTTTCTTGTATCAGAAGCAAGCGTGGGGGGGTTTGGTGAGGGTTTTGGATGGTGAGGATGTGAGGGAAGAGGGGAAGGGGACTGTGGGAAGAGTGGTGAGTGAGAAGATTGAGAAGTTTTATAAGGGTTTGAATGAGGTTTGTGAGAGGCATGTTAGAGGGGTGTATAGTATACCTGATGTGGATTTGAGGGAACAGATGAGGGAAGCAACTGTGAGGCTTGTGGTGCCGGCTTATGCTGAGTTTTTGGAGGGTTATTCGGGGTTGTTGCAGAGGAAGGGGTACCCTAGTGTTGAGAGGGTGAGAGGGTTGGTGGGGAAGGCTTTTGATGGGGGAAAGTTGTTGAAGAGGAGGGGATCTGGTTCTAATGATTGGAATGTTGCAAGGAACTCTGGGTCTTTGGAGAGGGATGTTAGATCAGGCAATGGTGGTGGTAGCGATGATATTTGA 2361 0.4968 MSYKPCVSTKRNKDTGFAYSKLPSCRFVCFPRSNAICLLVHIDAYLFHLVLLCLRQYAQFLLSLSFHPHLFIYTHSQPQTTRTIHAPTTMASSPEDPTLLKLESACSDLKALLRASEETQENLGTTETRFDLLQGSLSTASRRIVPLQSLAMSRKALDTRITRAISPALALLNTFKLTESLQNSLVELSTRLSSEKPHQKRLQRLLEYTECVDQLNEGINSICSEVEVVIQKLQEVVEFISRTKAADQYRDARLREALGTLKGLYEIEVDEMRFQGLLDQALVHVQDEFEGLLLRMKHRNLGDLVHQHGGDFRELGSSELEIEVLRRISTTLAANDCLDICIDIYVKARYRRAAKALMRLNPDYLRTYTPEGIDEMEWESLETAITLWIQHFEVALNKVLLSEKKLCEKVLGDFMDGLIWPECFIKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLEKLKPEMSQIFEGEPGMDICTRFRELEKLIIDASSKVFWEFGLQIEGNIDGLPPPQDGSVPKLVRYAINYLKYLTTVNYRTSMVKVLRTQQTWKGSSNDMSSDEGLLKLAISNVMEALQRNIEAKRLCCRDKILVHVFTMNTYWYIYMRTKNTELGEVLGEKCMKESYKAVAEESAFLYQKQAWGGLVRVLDGEDVREEGKGTVGRVVSEKIEKFYKGLNEVCERHVRGVYSIPDVDLREQMREATVRLVVPAYAEFLEGYSGLLQRKGYPSVERVRGLVGKAFDGGKLLKRRGSGSNDWNVARNSGSLERDVRSGNGGGSDDI 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00349 786 MobiDBLite consensus disorder prediction 763 786 - -
Pumo9g00349 786 Coils Coil 99 119 - -
Pumo9g00349 786 SUPERFAMILY Cullin repeat-like 253 726 IPR016159 -
Pumo9g00349 786 Gene3D Exocyst complex component Exo70 238 755 - -
Pumo9g00349 786 PANTHER EXOCYST COMPLEX PROTEIN EXO70 218 728 IPR004140 GO:0000145|GO:0006887
Pumo9g00349 786 Pfam Exo70 exocyst complex subunit 388 727 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00349 Pumo-Chr9 5482989 5485790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00349 92 734 EXO70 exocyst subunit family AT4G31540 28.723 2.99e-75 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00349 9 5482989 5485790 Pumo9g00349 9 5482989 5485790 ECH