Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00333 ATGCGGAGAAAGCGCAGCAACCTCGTGCACTGCGTCCCGAGTCCAGTGCGTTGGTCACTCACCATGGCGGAGCAGCCTCTGAAGAAGCGAAAGCTCTACGAGCCTTTACCAGAACCGCCACCGTCTTCGCCTCCGTCACTGCCGCTGCCGGCAACCGAAGCAGCCCCTCCCTCTCCGCAAACCCTACCCACGCCGTCCACTCCGCCGCTGTCTCAGGAGGAGATTCTCGCGAAGCGGCGGAACAAGGATGAAATTCGAAGCGTGTACGAAGGTTACAAGCGGATTAAGCGTTGCCTGCTTCAGAAGGACGCTCCCTCCTCCATGTCTGAACTCGAACAGAGTTATCTCGCTCTCATCACTTCGTCCAGAGGTTGTATGAGTGTACAAAGAATTGTGGCTGATCTTATTCCTCGGTATGCATGTCACTGTCCAACTGCTTTGGAAGCTGCAGCTAAAGTTGTTATTAATATGCACAACTTGAGTTTGGCATTGATCAGCAGAGGAGAGGATTCCAGTGGTATTGCATTTGAAACTGCTAGAGCCTGCATTTGTGGCCTAGCTGATGTTTGTTGTGTTGCTTCATCGGTGGCACCAACATCAGCTGTAATTAGAGGAATTTGCTCAGAAGTTTTTCAGAATGTGCTTACCTTTTTTACAGCCTTATTTGAAGGAAAGGATGTCTTACAGATGGTCGACAAGAATTTCCTGAATATGCAAGATACCCCTGAGGCCTTTTCTGAGTCGAAACAAAAGGTTTTAGATGAAGATGAATCTTCATTGACTAAACTGTCCAAGTTGCGTGCGTTATGTCTACTTTGGATATTCTTCTCTTGTCCAAAAGATCTGCTTGCAGCTTGTTTGGATCTCTTAGGCTCTGCCACAAAAGAGGGAACTAATGACGAAGGACAGCGTTTTCTGAGCCTGGTGACTAGCATGTTTGATGATGATAAAGCAGTTCACCTTTTGGAAAGAACAATCGGTGGACCTAAATCATGTACAGATTCTATTGGGTCAGGCATCAGAGACAATGAGGCTGGTGAAGAAATTATGACTGAAGAGAACCATGTTTCTGGTGGTGATTCATCTGTTGGCAAGAGCTGCTTGCTTATACAGGTCCTTGACAGGGACCCTTCACTGCGGAAATGGATGTTGTGTAGATGTAAGAAGTTACTTGATTTGCTCTCCAATGCATCACTGGAAATAACGTCAGTACTGCAAGGAATTCTTGGAATGTTTGCTCAACAAACAGATTTGGAAGACTGTCAAGCAGATAGTGATGAAGATAAATCTGATTCTTCAATTTACAAGAATAGGAACTACATGGTTCCTAGGATCTCTGAGGAACATGAAAGCATTGGTGAATCATCTGGAAAAGGCAGCAGTTTGAGAGTTCATGTTGGTTCTTCTAATGGTGGTTTTACTGATAAGGTTTCTGATAAATATGTGATGGCTCATAGCTCTGCAGTTTCTCTTGACAATGTTCCTGCATTAAAAGTGGGTTCACATTATGATAATGGAGTCTCAAAACCCATGAGCATTGGGGTGGGGGAGGAAGGGAATATGCCCAATGTTAGATGTTCCACACCTAGGGACTTGGTAGGCCATAAAATATTCTCACCTGCAGTTAGAACACCAGTAGACTTTAGGAGCAATTCATTTGATGGTAGAAATGATTTCCTGAATGTGGAGAAAAATCAAGTCTTAAATATGAATTTCAATTCACCTCCGCTGAGATCATCTAGCGGATCTGTTAGTAATTCTTTGGCATCTCCTAACCATCATTTTGTGTCACCAACTGCTTCAACAAAAAGTCAAATTGTCTGGTGCTGTGATGGGGATCCTGCAGCCATGGATATTGTTTCTGCTTCTAAGCAGCTATGGATAGGTTATGTAGGTCCTGATGTGCCTGAAAGTCATATAAGGTTTCAGTTAGAGAGATTTGGTCCTATTGAACAATTTTTTTTCTTCCAAGTAAAAGCATTTGCCTTGGTTGAGTACAGAAGGATCATTGACGCAATAAAAACTCGACACTGTTTACCTGGATGTTTTCCTTGCCGTGTAAAATTCATGGATATAGGACTTGGAACTAGGGGTGCAATGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATATTCCCAATCAATGGGCCAAGGATGAGATCATGCATGAAACAAGGAAAGTGATCCACAAGGGACCTCTCGCATTCATTGATCTTAGCTGTGAGTTTGCATTACTTATGGAATTTGAAACTCCTGAAGAAGCTACAGCTGTCATGTTGCATCTGAGACAACTCCGAAGAGAAAGAAGTAACTACAACCAGCATTTTGGTCCAGGAACAGTTAATGTTGGAATTGGGCATGCTTATATGGATGGTGCAAGGCCTATACCTGCCCCTCCCCATCATGACCTTAAAGTTAACAACCCTGCTGGATCACCTCATGCTCGAACTCTACCAGGGAGCCCTGCTGATAGCAATCGTACAAGGATGTCTCACTTGTCCACCTTACTTGCTTCATTGCGCACAAAGTATAATATTAATCAAAACCTAGGTCTCAATGATAATTATATGACTGGAAATAATTGTCCTCCCATGCGTGAGGAAGATATGGTGCCATCCAGCACTCTGTGCATAACTATTCCACAAAGTAGCTCTTTGTTCCTCACAGATGATGAGTTAATGGCCATTTGCAATCTTGCCATTGGAAACTCTGGATCCATTGTGCAGTTGACACAAGCAAATATGCAGATGGGATGTAGTTGGTTTGTCGAATGTAGTAATGTTGACGGTGCAGTTTCTGTTCTAAAGAATCTCCGTGGTTGTCCAGGATTGTTCTTCCAGATAGAATTCAGCAAACCTGGACATCAGAATGCTGTACCATTTTCAGTTAAACCAGAGAACAATTCAATGGAGCTTGTATCCCCCAGAATTAATTCTGAAAATCATACCAGTGGAATACAGGGTGCACCTCTGCCTCAGTCAAACTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGGTTGGAGCAAGGAAACCTGATGGTTATGATAATTTGTCACAGGATCCTCATCAAGGAGGTAATGTTCCGCATTCACACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAAATTCAGTCATCTCCTTTTGTTCGCCCTGTTTATGTTCCTCCAAATGGTCCATGGGATCGTCGGGGAATAAATAATCATTTACCTGTTAGCCAATTCAAGACAGGAGCAATGCCAAATAATTTTCATGGTAATGCTGTTGTCAGTCCTTTTATTCCTGCTTCAGTAACTCCACTTGCTCAGATACAAGGAACTCCAATGCATCCCTATAACCAGCAGGTGCCTCCATCAATTATACCACCACCTTTATCATCCTTGCCACCTCCTCAGCCTGAAATGCCACCTCCACTTCCTCCTTCTCCACCACCTTTACCCCAGGTTCAGCCACCCTTGGTTCCTCCACTGCCTAGTTCTCCTCCTCCCCCTCCTCCTCCACCACTGCCTGTTCAAGAACCAGTTAATATGGAATGTTCAGGGCAGTCTTTGCAGTATCAATGGCAGGGGAATCTCTGTAAAAGTGGGGTTAATTACTGTACAATTTATGCATGCAAAGCAGATTCAAATATTTGCCGATATTCAAATGCCATACCTGAGCCTGCTGAGTGGCCCTCAAAATTAGACATGACAAAACGCACAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAAGGGAAGTGTGCCGTTTGATCCCATCTTCCACTAGTGACCACAGAAGGTTTCAGGATTTCATATCATACTTGAAGCAGAGGGATTGTGCTGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGCTGCTATTCATTCTCCCCCACTCACTTGAAACGTGCTCTTTGCTTTCTATTGCACCTGATCCATCAGATTGTCCTCATTGCTTTGGTTCTTCCCAAAGAAACAAACTTTGA 4011 0.439 MRRKRSNLVHCVPSPVRWSLTMAEQPLKKRKLYEPLPEPPPSSPPSLPLPATEAAPPSPQTLPTPSTPPLSQEEILAKRRNKDEIRSVYEGYKRIKRCLLQKDAPSSMSELEQSYLALITSSRGCMSVQRIVADLIPRYACHCPTALEAAAKVVINMHNLSLALISRGEDSSGIAFETARACICGLADVCCVASSVAPTSAVIRGICSEVFQNVLTFFTALFEGKDVLQMVDKNFLNMQDTPEAFSESKQKVLDEDESSLTKLSKLRALCLLWIFFSCPKDLLAACLDLLGSATKEGTNDEGQRFLSLVTSMFDDDKAVHLLERTIGGPKSCTDSIGSGIRDNEAGEEIMTEENHVSGGDSSVGKSCLLIQVLDRDPSLRKWMLCRCKKLLDLLSNASLEITSVLQGILGMFAQQTDLEDCQADSDEDKSDSSIYKNRNYMVPRISEEHESIGESSGKGSSLRVHVGSSNGGFTDKVSDKYVMAHSSAVSLDNVPALKVGSHYDNGVSKPMSIGVGEEGNMPNVRCSTPRDLVGHKIFSPAVRTPVDFRSNSFDGRNDFLNVEKNQVLNMNFNSPPLRSSSGSVSNSLASPNHHFVSPTASTKSQIVWCCDGDPAAMDIVSASKQLWIGYVGPDVPESHIRFQLERFGPIEQFFFFQVKAFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDIGLGTRGAMNGVAVGSSSHIYVGNIPNQWAKDEIMHETRKVIHKGPLAFIDLSCEFALLMEFETPEEATAVMLHLRQLRRERSNYNQHFGPGTVNVGIGHAYMDGARPIPAPPHHDLKVNNPAGSPHARTLPGSPADSNRTRMSHLSTLLASLRTKYNINQNLGLNDNYMTGNNCPPMREEDMVPSSTLCITIPQSSSLFLTDDELMAICNLAIGNSGSIVQLTQANMQMGCSWFVECSNVDGAVSVLKNLRGCPGLFFQIEFSKPGHQNAVPFSVKPENNSMELVSPRINSENHTSGIQGAPLPQSNWHFPGSREMSEVGARKPDGYDNLSQDPHQGGNVPHSHSGAHGPSIPPPQQIQSSPFVRPVYVPPNGPWDRRGINNHLPVSQFKTGAMPNNFHGNAVVSPFIPASVTPLAQIQGTPMHPYNQQVPPSIIPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPPLPVQEPVNMECSGQSLQYQWQGNLCKSGVNYCTIYACKADSNICRYSNAIPEPAEWPSKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSTSDHRRFQDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPDPSDCPHCFGSSQRNKL 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00333 1336 MobiDBLite consensus disorder prediction 811 832 - -
Pumo9g00333 1336 MobiDBLite consensus disorder prediction 29 71 - -
Pumo9g00333 1336 MobiDBLite consensus disorder prediction 1112 1177 - -
Pumo9g00333 1336 SUPERFAMILY RNA-binding domain, RBD 613 683 IPR035979 GO:0003676
Pumo9g00333 1336 Pfam SPOC domain 1188 1315 IPR012921 -
Pumo9g00333 1336 CDD SPOC_FPA-like 1193 1324 - -
Pumo9g00333 1336 MobiDBLite consensus disorder prediction 984 1066 - -
Pumo9g00333 1336 MobiDBLite consensus disorder prediction 1121 1177 - -
Pumo9g00333 1336 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 23 1290 - -
Pumo9g00333 1336 MobiDBLite consensus disorder prediction 36 66 - -
Pumo9g00333 1336 Gene3D - 615 696 IPR012677 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00333 9 5247085 5264931 Pumo9g00333 9 5247085 5264931 ECH