Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00327 ATGGACCCATCTATCATGAAGCTTCTAGAAGATGACGAGGATGAAACAATGCATTCAGGGGTGGATGTGGAAGCCTTCCAGGCTGCCCTAAATAGAGATATAGAAGGAGATGTGTCTACTTCTCAGTTTTCTGGTTCAGATGCAGTGTTGTCTCAAGGAAGCAATAATACATCAAGTCAATCTTTATCACAGTGGCCTACTTCTAACCATGACAGCCAAACTGACTGTCAAAATCAAGAACCTAAAACTGCACAACAGCAAGAGCAACCTTCATCTGAGATGGAGCTGAAGCAACGTGGATCTCTTGTGGAACAACTACAGCATGTTGCTTCTCAGGACGTAAATAATCCTCATTTATCACAGAAACAATCTCAAGATGAATGTCACCAAGCACCAGCTGTACAAGTTTGCCTCCACAATTCTCAAGCTATTGGAATTCAGAATTCTGGAAAAGACCTAGTCCTTAATAATGAGGTAGTAAAGAATCATAACCCCAGCAGTGAATCTCAGTATGCGAAGTTGCAGCAGATGAGTAATCAACAGGTTACAGTCTCTGAGCAGCCAAGTAGTCAAGGAACTCGTAGTACTAAACAAGTACCATTTGGCCTGTTGCTACCCATCTTACTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACCTTATTTGCTAAATTGAAGAAAGATGAAATACCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTAGGGGACCAGATGCTTAGATTAGCATTATCAAAGGTGCAAATGCAACCACAGACAAGGCCTAATCAAGCATCTGCTGGGCAGCAGCACCCTGTAAGGATGCCAACTGTTAGTTCAGGTGCAAGGCAATTGAATGATCCCCATGCTTTGGCACAGATGCATCAGAGAAGTATGAATGCTGCTGTTGACCAATCTCGCATGAGTTCTTCAGCTGGCCAAACTATGGAGAGCAATGCTAGAAAATCTCAGGAATTGGATGTTAAAATAGAATCTCAAGGATTGCAACCAAGCCAATTGACATCTTCCAGTTCCAACACAGTTGGTCAAGAAACAGAAAGAACATCAGTTCACATACAAGGGCTTAATAAGCAGCAGCAACAACATCTACATTTCCCATCAGCATTTGGAAATAGTGGTGGTAACTATAACCCTTTTTCTGGGACAACCAGTAGTTCCACTTCATCTATCAAACCACAATCGCATGATTCACATATGAGTCAAATTCCGTATCAAAGTATTGGTTCAAATCACTTAGGTGGGTCAACACATGGTTTGAATGTAATTGGTATGCCAAAACTTGAACAGAATTCTTTCAATGATCCCAAGAGACTGCCAGGCGGATCTGTGTCTCCTGCTGTAAACAATACAGCATCTCAACAAACTTCAAATGCTTGGCAACCATCAACAAACAAAGAGCAAAATCTTGGCTTAATGTCATCTGTTTCTTATGTCAAAAAGGAACCTAGTGACTTGTCTACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGGGTGGTGCTAGTCAAGGAACTGTAAAGGATGAATTTTCAAGAGGTCTTCCAGCATCCACAAGCATGCGACCTACAACATCTACTGGCTTGCTGCCACACAGTTCTGCTTCCCCTTCTGTAATGACCCAACTAGACCCTAGTGTCTCGATCCCATCAAATGCTTCTGGAATTGTTGCAAGGACTCCTCTTAAAAAGCCTGCTGTTACCCAAAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTCCAAGTAAAAAGCAAAAAACTTCTGGGGGATCTGTAGAACAAAGCATTGAACAACTTAATGACGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCTAAAGAGGATAGTCGAGTGTCAGAAGCTTCTCGAAAGGCTGTGCAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGAAATCATGGCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTGTCATTGTGTGTGGAGGAAAGGATGCGTGGACTGATAAGTAACCTGATTAGAATATCAAAACAGAGGGTTGATTTTGAGAAAACAAGACATCGGACTGTTGTCACTTCAGACGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGGAAGAGTGGGAGAAAAAACAGGCAGAAGCAGATAAGATTCAGAAACTAAATGATGTTGATGGCAATACTGGAGTTGATGGTGACAAGGAGAAGGACGACAGCCGTGCTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGCTGTCAAAGTGGCAACTTATAGCTGAGCAAGCCAAGCAGAAACGTGAAGGGGGGGTGGACGTGTCATCCGGTTCTCAATCAGCTAAAGATGTGAACCGCAAATCTTTATCAACATCTGGAAGAAGTACAAAAGATAACCAAGAAGGGGAGAAAAAAGGTTCAACCACTTTTATAACAAGTTCAGTGGCTAGAAAGCTTGGAAGGAGTCATGCCATGGCACCTCAAACTAGGGTAGCTCGAAGCATCTCTGTCAAGGATGTGATTGCAGTCCTGGAAAGGGAGCCCCAGATGTCTAAATCTCCACTCATACATCGCTTGTACGAGATAATTCATTCCGATGCCCCAGTTGAACAAGGTTAA 2802 0.4272 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIEGDVSTSQFSGSDAVLSQGSNNTSSQSLSQWPTSNHDSQTDCQNQEPKTAQQQEQPSSEMELKQRGSLVEQLQHVASQDVNNPHLSQKQSQDECHQAPAVQVCLHNSQAIGIQNSGKDLVLNNEVVKNHNPSSESQYAKLQQMSNQQVTVSEQPSSQGTRSTKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKKDEIPKDSFVRLMKGIVGDQMLRLALSKVQMQPQTRPNQASAGQQHPVRMPTVSSGARQLNDPHALAQMHQRSMNAAVDQSRMSSSAGQTMESNARKSQELDVKIESQGLQPSQLTSSSSNTVGQETERTSVHIQGLNKQQQQHLHFPSAFGNSGGNYNPFSGTTSSSTSSIKPQSHDSHMSQIPYQSIGSNHLGGSTHGLNVIGMPKLEQNSFNDPKRLPGGSVSPAVNNTASQQTSNAWQPSTNKEQNLGLMSSVSYVKKEPSDLSTEQQNRHNLSKLHGYSSVNSAQLEQGGASQGTVKDEFSRGLPASTSMRPTTSTGLLPHSSASPSVMTQLDPSVSIPSNASGIVARTPLKKPAVTQKKPLEALGSSPPPPSKKQKTSGGSVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAVQEEEERLILQKAPLQKKLIEIMAKCGLKGMSNDVEKCLSLCVEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWEKKQAEADKIQKLNDVDGNTGVDGDKEKDDSRAKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLIAEQAKQKREGGVDVSSGSQSAKDVNRKSLSTSGRSTKDNQEGEKKGSTTFITSSVARKLGRSHAMAPQTRVARSISVKDVIAVLEREPQMSKSPLIHRLYEIIHSDAPVEQG 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00327 933 Gene3D Histone, subunit A 668 713 IPR009072 GO:0046982
Pumo9g00327 933 Pfam Transcription initiation factor TFIID component TAF4 family 623 919 IPR007900 GO:0005669|GO:0006352
Pumo9g00327 933 MobiDBLite consensus disorder prediction 604 618 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 453 478 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 828 888 - -
Pumo9g00327 933 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 6 922 IPR045144 GO:0005669|GO:0006352
Pumo9g00327 933 MobiDBLite consensus disorder prediction 38 101 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 298 355 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 163 196 - -
Pumo9g00327 933 FunFam Transcription initiation factor TFIID subunit 4B 666 713 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 518 569 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 761 798 - -
Pumo9g00327 933 Pfam RCD1-SRO-TAF4 (RST) plant domain 195 258 IPR022003 -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 437 478 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 332 355 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 582 618 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 833 857 - -
Pumo9g00327 933 CDD TAF4 618 919 IPR007900 GO:0005669|GO:0006352
Pumo9g00327 933 MobiDBLite consensus disorder prediction 539 569 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 261 286 - -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 301 324 - -
Pumo9g00327 933 ProSiteProfiles RST domain profile. 192 263 IPR022003 -
Pumo9g00327 933 MobiDBLite consensus disorder prediction 371 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00327 Pumo-Chr9 5124333 5131387 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00327 9 5124333 5131387 Pumo9g00327 9 5124333 5131387 ECH