Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00326 ATGATGGAGCTTCTAACGGTGGTGGATGATTTTTTTGTCACGGCGTCCCTGGCGCTTCTTCTTACTTTCATCGTCTTAAAGCTTGTTGAGGCCATGAACGACACTCACGCCACACCAAAACGTCACGTCCACCGCCAACCGGATCGTCCGGTTTCTCATGCGGAGCGCTTCACGGTTAAGCCCGCTCAAGGCAAGACCAAGGTCGGTTTTATTACTCCGGTTCAGGAGGAAATTGCCACGTGTGTAGTAGAAACCAAACACAAGATAGAAAAAAAGGCTACCGTCAAACCGGTTCGTCTTCGTGGGAAACTGTTCACGGTTCACCCCGCTCAAAGCAAGAGCAGCGTAGAAACCGAATGCAAGATAGAAGAAGCTACGGTCGAACCGGTTCAAGCTGCCACGTGTGTAGAGACTGAACGCAAGGTAGAAGAGGCTACGGTCGAACCGGTTCGTTCGGTTCCTACGGTTCAGCCAGCTCAAAGCGAGAGCACGATCGGTTTTATTAGTCCGGTTGAAGCTGACACGTGTGTAGGAACAGAACACAAGAAAGAAGAAGCTACGGTCGAATTCGAATTCGATTCCAACGTTGTTGTCGAGTCACCGGTGAAATCAGACACAGAGAAAGACATTGTCGTTAAAGAGGAAATCGCTGAGGCCAATGAAGGAATACAAGAGTTTGACGATTCTGCGGAGAAGAGGAACGTTGAAAGTGTTGAAGAAATCAGCGTAGAACCTTCCACTGAAATTGAAGCTTCTGTTGTAGATAGCGGCGTAAAAGAGAATGATCATGATATTGATGATGATTGGGAAGGGATTGAGAGAAGTGAGTTGGAGAAAGAGTTTATGGCGGCTACGGAATTTGTTAGTGGCGACGAAAATCGATTGGGGGGTGTTGGAAGCAATGTGAAAATGGAGTTGTATGGGCTTCACAAGGTTGCCACCGAAGGGCCATGCCGTGAACCTCAGCCAATGCCTCTCATGCTCGCCGCACGTGCCAAGTGGAATGCTTGGCAAAAGCTGGGGAACATGAATCCAGAGGTTGCAATGGAGCAGTATATCAGCCTTCTTTCGGATAATTTTCCTGGATGGATCAAAGATACTTCTGCTGGAATGAGTGAACATGAACCCACAAGGCCTGAAGTTTCTGAGTCTGCTGCTTCTGATTTGAGCACAACTCTGTCTCATCAACCAATGATCATAACTGAAAGGGAACTTGAACAGCAGTCTGATTCCAAGGACCGTAGCCCACTTACAGAGTCAGATTTAGAGAACAACGTAAGATTTTTAAAATCATTCAGACTTGTACATTGA 1311 0.4722 MMELLTVVDDFFVTASLALLLTFIVLKLVEAMNDTHATPKRHVHRQPDRPVSHAERFTVKPAQGKTKVGFITPVQEEIATCVVETKHKIEKKATVKPVRLRGKLFTVHPAQSKSSVETECKIEEATVEPVQAATCVETERKVEEATVEPVRSVPTVQPAQSESTIGFISPVEADTCVGTEHKKEEATVEFEFDSNVVVESPVKSDTEKDIVVKEEIAEANEGIQEFDDSAEKRNVESVEEISVEPSTEIEASVVDSGVKENDHDIDDDWEGIERSELEKEFMAATEFVSGDENRLGGVGSNVKMELYGLHKVATEGPCREPQPMPLMLAARAKWNAWQKLGNMNPEVAMEQYISLLSDNFPGWIKDTSAGMSEHEPTRPEVSESAASDLSTTLSHQPMIITERELEQQSDSKDRSPLTESDLENNVRFLKSFRLVH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00326 436 Gene3D - 272 378 IPR014352 -
Pumo9g00326 436 MobiDBLite consensus disorder prediction 405 419 - -
Pumo9g00326 436 MobiDBLite consensus disorder prediction 383 404 - -
Pumo9g00326 436 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 277 365 IPR000582 GO:0000062
Pumo9g00326 436 SUPERFAMILY Acyl-CoA binding protein 276 363 IPR035984 GO:0000062
Pumo9g00326 436 Pfam Acyl CoA binding protein 278 356 IPR000582 GO:0000062
Pumo9g00326 436 MobiDBLite consensus disorder prediction 366 419 - -
Pumo9g00326 436 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 8 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00326 Pumo-Chr9 5119547 5123142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00326 211 377 Acyl Lipid Metabolism Gene Families AT4G24230 46.154 9.24e-40 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00326 9 5119547 5123142 Pumo9g00326 9 5119547 5123142 ECH