Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00314 ATGTTAATGCTAACATGCGCAGTGTTCTGGTGGATTGGCTGGTGGAAGTTGCTAGAAGAATACAAACTTGTTTCGGACACGCTTTATTTTTGTGTTGCATATATTGATAGGTATTTGTCGTTGAATGCTTTGTCGAGACAGAGGTTGCAATTGCTTGGGGTTGCTTCAATGCTTATTGCTTCGAAATACGAAGAGATTAAGCCACCTGAGGTTGAGGATTTTTGTTACATTACGGATAACACATACTCTAAGGAAGAGGTTGTGAACATGGAAGCTGAGATATTGAAGGCTTTGAAGTTTGAATTGGGTGGTCCTACAGTGAAGACATTCTTGAGGAGATTCTCTAGAGTTGGTCAAGAGGGTGTTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTATAAAGTTTTTGCCATCTTTGGTGGCCGCATCAGTTGTATTCCTAGCGAGATTTATGTTTAGCACAAAGACACATCCTTGGAATTCGGCGCTCCATCAACTCACAAGATATAAACCTGCTGACTTGAAGGAATGTGTTCTAATCTTACATGACTTGTACCTCAGTAGGAGAGGGACCTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCCGAGATACCTCATTCTTTTTTTGAATTTGAGGAGCAGATTCTTAGGCAATTGTAA 741 0.4076 MLMLTCAVFWWIGWWKLLEEYKLVSDTLYFCVAYIDRYLSLNALSRQRLQLLGVASMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEAEILKALKFELGGPTVKTFLRRFSRVGQEGVDTSDLQFEFLSCYLAELSLLDYNCIKFLPSLVAASVVFLARFMFSTKTHPWNSALHQLTRYKPADLKECVLILHDLYLSRRGTSLQAVREKYKQHKFKCVATTPSPPEIPHSFFEFEEQILRQL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00314 246 PANTHER CYCLINS 17 222 IPR039361 -
Pumo9g00314 246 SMART cyclin_7 109 197 IPR013763 -
Pumo9g00314 246 SMART cyclin_7 15 96 IPR013763 -
Pumo9g00314 246 Gene3D - 7 96 - -
Pumo9g00314 246 CDD CYCLIN_AtCycA-like_rpt2 105 219 - -
Pumo9g00314 246 Gene3D - 97 232 - -
Pumo9g00314 246 Pfam Cyclin, N-terminal domain 15 102 IPR006671 -
Pumo9g00314 246 SUPERFAMILY Cyclin-like 105 230 IPR036915 -
Pumo9g00314 246 FunFam Cyclin A1 92 224 - -
Pumo9g00314 246 SUPERFAMILY Cyclin-like 16 102 IPR036915 -
Pumo9g00314 246 SMART Cyclin_C_2 105 228 IPR004367 -
Pumo9g00314 246 PIRSF Cyclin_A_B_D_E 12 235 IPR046965 GO:0016538|GO:0044772
Pumo9g00314 246 Pfam Cyclin, C-terminal domain 105 227 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00314 Pumo-Chr9 5021376 5024893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00314 3 237 Core Cell Cycle Gene Families AT1G47230 64.407 6.63e-112 324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00314 9 5021376 5024893 Pumo9g00314 9 5021376 5024893 ECH
Pumo9g00314 9 5021376 5024893 Pumo5g02491 5 68912484 68919730 PCT