Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00305 ATGGGAGGTTGGGCTATCGCGGTGCATGGTGGCGCTGGTGTCGACCCAAATCTCCCACTCGAGCGCCAAGAAGAAGCGAAACAACTTCTCACGCGCTGTCTCAATCTTGGAATCTCTGCTCTAAATTCTAATCTTCCCGCCATAGATGTTGTCGAACTTGTGGTGAGGGAGTTGGAAACGGATCCGCTGTTCAATTCGGGCCGTGGATCTGCCCTGACAGAAAAAGGAACGGTGGAGATGGAGGCTAGCATCATGGATGGCCCAAAACGACGATGCGGCGCCGTTTCGGGCCTTACCACCGTTAAGAACCCGATCTCGCTGGCTCGTTTAGTTATGGACAAATCCCCACATTCCTACCTCGCCTTCTCCGGCGCCGAAGAATTTGCTAGGCAACAGGGTGTGGAGGTTGTGGACAACGAGTACTTTATCACACCTGACAATGTTGGCATGCTCAAGCTGGCAAAGGAAGCAAACACAATCCTGTTTGATTACCGAATCCCAGCATCGGGGTACGAGACGTGCGGATCCGGTGTGGAGAGTCCGCTGCAGATGAATGGACTCCCGATCAGCGTGTACGCGCCTGAAACCGTTGGGTGCGTGGTGGTCGACCGGGAAGGCCGGTGCGCGGCTGCGACATCCACAGGGGGGCTGATGAACAAAATGACCGGTCGCATCGGTGACTCGCCACTGATAGGCGCTGGGACCTACGCGTGCGACGTGTGTGGGGTATCGTGCACCGGGGAGGGCGAGGCCATCATACGTGGCACCCTGGCGCGTGAGGTGGCAGCGGTCATGGAATACAAAGGCTTAAAGCTTCAACAAGCCGTGGATTTTGTCATCAAGCACCGTCTGGATGAAGGCATGGCTGGTCTCATTGCTGTGTCCAACTCTGGGGAAGTGGCTTATGGGTTCAATTGCAATGGCATGTTTAGGGGCTGTGCCACTGAAAATGGGTTCATGGAGGTTGGAATCTGGGAATAA 981 0.5535 MGGWAIAVHGGAGVDPNLPLERQEEAKQLLTRCLNLGISALNSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEEFARQQGVEVVDNEYFITPDNVGMLKLAKEANTILFDYRIPASGYETCGSGVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACDVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLKLQQAVDFVIKHRLDEGMAGLIAVSNSGEVAYGFNCNGMFRGCATENGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00305 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Pumo9g00305 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
Pumo9g00305 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
Pumo9g00305 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Pumo9g00305 326 CDD Asparaginase_2 5 318 - -
Pumo9g00305 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00305 Pumo-Chr9 4892644 4895676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00305 6 260 Miscellaneous Gene Families AT4G00590 28.777 3.77e-17 79.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00305 9 4892644 4895676 Pumo9g00305 9 4892644 4895676 ECH