Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00300 ATGGGACAATCTGTTTCCTCCACCGCCGCCGTCGCTAGCCGTCGCGAGAGGGACCAGGGCCACCGCTCCGTCAACGCCTCCAAGACCAGATCCACCGCCTCGGTTTCGCCGATGGCCGGTTATTCCTCCGGCGCCGGCGAAGACGAAAGCGAAAACTGTCGCGGCGAGGCCGTTACCGATGGAAACACTGACTACATCTCCGATCTCCCGAACGAGTGCCTGGCTTCGGTGTTTCAGTTTCTCAGCTCCGCCGATCGGAACAGCTGCTCGCTCGTTTGCCGGCGGTGGCTGCAGATCGAAGGACAGAGCCGTCACCGGCTTTCTCTCAAGGCCGAATCGGATCTGTTTCCGGCGATTCCGTCGCTGTTCTCTCGGTTCGATTCGGTGACGAAGCTCGCGCTGAAGTGCGACCGCAGATCCGTGAGCATACGAGACGACGCGCTCGTGCTGATCTCGCAGCGGTGCCCTAACCTCACGCGCCTCAAGCTCCGCGCGTGCCGCGAGCTCACCGACGCAGGTATGGAAGCGTTCGCGAAGAACTGCAAGGGATTGAAGAAGCTCTCGTGCGGATCGTGCACGTTCGGATCCAAAGGCATGAACGCGGTGCTCGACAACTGCGCCGCCCTGGAGGAGCTCTCCGTGAAGCGCCTCCGCGGAATCACCGACGCGGCGGCGGCGGAGCCGATCGGTCCCGGCGTGGCAGCGGCGTCGCTGAAAACCGTTTGCCTGAAGGAGCTTTACAACGGACAGTGTTTCGGAACGCTGATTCTCGGCGCGAAGAATCTGAAAACCTTGAAGCTTTTCCGGTGCTCCGGCGATTGGGACCGGCTCTTTCAGTTAATGGCAGATCGTGTCACGAACATGGTCGAGGTTCACCTCGAGAGGCTTCAGATTAGCGACGTTGGATTGCAAGCAATCGCGAATTATTCGAGTCTGGAGATTTTGCATCTTGTTAAGACTCCTGAATGTTCTGATATTGGACTTGTTGCTATTGCAGATAGGTGCAAGCTTTTGCGGAAGCTTCACATTGATGGATGGAAGGCAAATCGAATTGGCGATGAAGGGTTGATAGCTGTTGCAAAAGGTTGCCCTAATTTGCTTGAATTAGTGCTAATTGGAGTAAACCCTACTAAGCGAGTTTGGAAATGTTGGCATCTAATTGCCAGAATCTTGAGCGGTTGGCTTTGTGTGGAAGTGATTCGGTTGGTGATCCTGAGATATCTTGCATTGCTGCTAAGTGTGTGGCTTTAA 1251 0.5596 MGQSVSSTAAVASRRERDQGHRSVNASKTRSTASVSPMAGYSSGAGEDESENCRGEAVTDGNTDYISDLPNECLASVFQFLSSADRNSCSLVCRRWLQIEGQSRHRLSLKAESDLFPAIPSLFSRFDSVTKLALKCDRRSVSIRDDALVLISQRCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLDNCAALEELSVKRLRGITDAAAAEPIGPGVAAASLKTVCLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRVTNMVEVHLERLQISDVGLQAIANYSSLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDEGLIAVAKGCPNLLELVLIGVNPTKRVWKCWHLIARILSGWLCVEVIRLVILRYLALLLSVWL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00300 416 Gene3D Ribonuclease Inhibitor 108 406 IPR032675 -
Pumo9g00300 416 SMART fbox_2 69 109 IPR001810 GO:0005515
Pumo9g00300 416 MobiDBLite consensus disorder prediction 25 39 - -
Pumo9g00300 416 SUPERFAMILY RNI-like 114 379 - -
Pumo9g00300 416 Gene3D - 65 104 - -
Pumo9g00300 416 PANTHER UNCHARACTERIZED 67 379 - -
Pumo9g00300 416 ProSiteProfiles F-box domain profile. 63 99 IPR001810 GO:0005515
Pumo9g00300 416 CDD F-box_AtTIR1-like 66 104 - -
Pumo9g00300 416 FunFam F-box/LRR-repeat protein 3 isoform X1 65 105 - -
Pumo9g00300 416 Pfam Leucine Rich repeat 155 178 IPR001611 GO:0005515
Pumo9g00300 416 Pfam Leucine Rich repeat 286 307 IPR001611 GO:0005515
Pumo9g00300 416 SUPERFAMILY F-box domain 56 99 IPR036047 GO:0005515
Pumo9g00300 416 SMART LRR_CC_2 206 232 IPR006553 -
Pumo9g00300 416 SMART LRR_CC_2 181 205 IPR006553 -
Pumo9g00300 416 SMART LRR_CC_2 155 180 IPR006553 -
Pumo9g00300 416 SMART LRR_CC_2 285 309 IPR006553 -
Pumo9g00300 416 SMART LRR_CC_2 310 334 IPR006553 -
Pumo9g00300 416 SMART LRR_CC_2 335 362 IPR006553 -
Pumo9g00300 416 FunFam F-box protein SKIP2 101 389 - -
Pumo9g00300 416 MobiDBLite consensus disorder prediction 1 57 - -
Pumo9g00300 416 Pfam F-box 69 105 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00300 Pumo-Chr9 4793829 4795079 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00300 9 4793829 4795079 Pumo9g00300 9 4793829 4795079 ECH