Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00293 ATGGGTTCTAGTTCTATTACATTGTCCACAACCATGAACATGGCAATGGTGCTGTTGTTCATGGTTTTCGCGGTTTCATCGGCTTTAGACATGTCGATAATCTCCTACTACAACACTCATGTGGATAAGTCCACGTGGCACACCGACGAGGAGGTGATGTCAGTGTACGAGGAGTGGCTGGGGAAGCACGACAAGGTGTACAATGCACTCGGTGAGAAGGAGAAGAGGTTCCAAATCTTCAAGGACAACCTGCGCTTCATCGATGAACACAACTTTGTGAACCGAACCTACAAGGTGGGACTAAGTGCATGTTTACTTCTCCGAACAGAGTTGGTGGATTGTGTTACATCCTCTCTCCCCGAGGATGCTAAGGAGGATGTATACATCTTTCCTTCAAGTACATCATCGAGAATGGCGGCATCAGCTCCCAAAAGGATTACCCTTACGGTGGTGTTGAGGGGTGTATTCAGTGGGATTTGTGGTTCAGTAGTAAATCATGGTGTCCTGATTGTTGGGTATGGTTCAGATGAAGGTCAAGATTGGATTGTAAAGAATTCATTTGGTCCTAGCTGGGCAGACGATGGCTATATGAGATTAGGAAGAAATCTGAGTAATTGTAAATTTGGAGGTGCAAATTATCCCATTAAAAAAGTGACCCGTCAAGCTGTGCCCATTGAGCCTTTCAAAGTAATAACAAGGTCAACATAA 708 0.4477 MGSSSITLSTTMNMAMVLLFMVFAVSSALDMSIISYYNTHVDKSTWHTDEEVMSVYEEWLGKHDKVYNALGEKEKRFQIFKDNLRFIDEHNFVNRTYKVGLSACLLLRTELVDCVTSSLPEDAKEDVYIFPSSTSSRMAASAPKRITLTVVLRGVFSGICGSVVNHGVLIVGYGSDEGQDWIVKNSFGPSWADDGYMRLGRNLSNCKFGGANYPIKKVTRQAVPIEPFKVITRST 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00293 235 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 164 174 IPR025660 -
Pumo9g00293 235 SMART Inhibitor_I29_2 56 111 IPR013201 -
Pumo9g00293 235 Pfam Papain family cysteine protease 153 208 IPR000668 GO:0006508|GO:0008234
Pumo9g00293 235 SUPERFAMILY Cysteine proteinases 48 207 IPR038765 -
Pumo9g00293 235 Gene3D Cysteine proteinases 134 218 - -
Pumo9g00293 235 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 156 207 IPR013128 GO:0008234
Pumo9g00293 235 SMART pept_c1 80 215 IPR000668 GO:0006508|GO:0008234
Pumo9g00293 235 Gene3D - 35 105 - -
Pumo9g00293 235 Pfam Cathepsin propeptide inhibitor domain (I29) 56 101 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00293 Pumo-Chr9 4713763 4715333 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00293 9 4713763 4715333 Pumo4g01928 4 26138150 26140322 ECH
Pumo9g00293 9 4713763 4715333 Pumo9g00293 9 4713763 4715333 ECH