Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00291 ATGAGTAGCAGCATGCCTGCAAAATTGTTGCTCACAACTTTGTACTACATCCTCTTGTTGTCTCTTCCTATCCAAATGTCTCCTCATGATGTTAACATAGGCACACACAATTTCAAAAGTAGTAGTAGTGGCCACAGGAGCAAAAGTGGTGGTGGCTCAGCCAAAGGTTGCAACAACAACAACAACAACCAATTGGACACAAACACAACACCATGTCAAAAATCAACAACCATTCAAGCAGTTCCTGCAGCTTCACCACCTCCTCTTGTGTTTGCAGACCAAAGACTTCAAGTAGTGTACCCAATTATCCAAAAATTCAAGTCCACCATCACCTCTGATCCATTAGGAGTGACCAAAACTTGGGTAGGATCAGATATATGCAGCTACAAAGGTTTCTACTGTGACACCCCCCCAGACAATAGTTCTGCCACTGCTTTGGCCTCTATTGACTTCAATGGTTTCAAACTAGCTGCTTCCACCCTTGATGGCTTCATTGATAACCTTCCAGATATTGCTCTCTTCCATGCAAATTCCAACAATTTTGGTGGCACAATCTCACCCCAAATAGCCAAGCTCCCTTACCTCTATGAGCTTGATGTCAGCAACAACCAATTATCTGGTCCATTTCCCACTGCTGTTCTAGGCATGAGCACTTTAACATTCTTGGACTTACGGTTCAATTTCTTCTCTGGGGCAGTCCCACCACAAATATTCATACAAAATCTCCAAGTCCTTTTCATAAACAACAACATCTTCACTCAAGGGTTGCCCGATAACTTAGCCTCCACTCATATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCAATTCCAAGAAGTCTTCCCAAGGCTTTGGCCACTCTAAGTGAAGTGTTGTTACTCAACAACCAGTTAACTGGTTGTTTGCCTTATGAGATTGGTTTTCTTGAAGAGGCCACAGTGTTTGATGCTGGGAACAACCAATTGACAGGTCCTTTACCTTTTTCTTTGAGTTGTCTTGAGAAGGTGGAGGTGCTCATTTTGGGTGGTAATCTATTGTATGGCATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCTGATAACTATTTCACACTTGTGGGACCACTGTGTAGGATGCTGATTCAGAGAGGAATTCTTGATGTGAGGAACAATTGTATTCCTGATCTTCCATTCCAGAGATCAGTGATGGAGTGTGCTGAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATGTGGTTTCATGGTCTCATCCCTTGTAAGCTTCCTTTTCCACATTCCATTCCTTAG 1317 0.4305 MSSSMPAKLLLTTLYYILLLSLPIQMSPHDVNIGTHNFKSSSSGHRSKSGGGSAKGCNNNNNNQLDTNTTPCQKSTTIQAVPAASPPPLVFADQRLQVVYPIIQKFKSTITSDPLGVTKTWVGSDICSYKGFYCDTPPDNSSATALASIDFNGFKLAASTLDGFIDNLPDIALFHANSNNFGGTISPQIAKLPYLYELDVSNNQLSGPFPTAVLGMSTLTFLDLRFNFFSGAVPPQIFIQNLQVLFINNNIFTQGLPDNLASTHILLLTLANNKFMGPIPRSLPKALATLSEVLLLNNQLTGCLPYEIGFLEEATVFDAGNNQLTGPLPFSLSCLEKVEVLILGGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTLVGPLCRMLIQRGILDVRNNCIPDLPFQRSVMECAEFFATPRMCPFMWFHGLIPCKLPFPHSIP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00291 438 Gene3D Ribonuclease Inhibitor 268 408 IPR032675 -
Pumo9g00291 438 SUPERFAMILY L domain-like 108 396 - -
Pumo9g00291 438 Gene3D Ribonuclease Inhibitor 102 267 IPR032675 -
Pumo9g00291 438 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 55 429 - -
Pumo9g00291 438 MobiDBLite consensus disorder prediction 35 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00291 Pumo-Chr9 4688801 4690505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00291 87 415 Leucine-rich Repeat extension Gene Families AT3G24480 42.857 2.44e-83 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00291 - - gmx:100808707 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00291 9 4688801 4690505 Pumo9g00291 9 4688801 4690505 ECH