Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00288 ATGGAGACTGTGATGGCCTCCGCCGTCGTGAATTTCTTGAACGCAACGTTGGATTGGGTGAAGTTCGCGTCAGATGGTCCTTCTGCGCGAGCTGTAGTTTTTGGAGTCCATATCGGTGGACATTTGTTTATCGAAGTGTTTTTGCTGGTGGTCATACTTTTCTTGCTTTCACAGAAAAGTTACAAGCCTCCTAAAAGGCCTTTAACAAACAAGGAAATTGATGAGTTATGTGACGAATGGGTTCCGGAACCCCTTATTCCTTCTCTTAATAAAGAGTTGCAGTATGAACCACCAGTGCTGGAGAGTGCTGCTGGGCCACATACCATAATTAATGGCAAAGAAGTTGTCAATTTTGCTTCAGCAAACTATCTTGGATTTATAGGTCATCAAAAGCTACTTGACTCATGTTCATCTGCTTTAGCAAAATACGGTGTTGGTTCTTGTGGTCCCCGTGGGTTTTATGGGACAATTGATGTCCACCTTGACTGTGAAGCAAGAATAGCGAAATTTTTAGGAACCCCAGATTCAATTCTCTACTCTTATGGACTTTCCACCATGTTCAGTGCAATTCCTGCTTTCTCTAAAAAAGGAGATATAATTGTAGCGGATGAGGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTTTCTAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGGACTCTTTAAGAGAAACTCTAGAGAACATTACTTCCAAATATAAGAAGGCCAAGAATTTGAGGCGTTATATTGTTCTTGAAGCTGTCTACCAGAATTCTGGCCAAATAGCACCCTTGGACGAGATCATTAAATTGAAGGAAAAATATCGTTTTCGTGTTTTGCTGGATGAGAGCAACTCATTGGGTGTGCTTGGAAGTTCTGGAAGAGGTCTCACTGAACACTGTGGAGTTCCAGTTGAGAAGATAGACATTATAACTGCTGCTATGGGACATGCATTGGCCACAGAAGGAGGATTCTGCACTGGAAGTGCAAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGTTATGTCTTTTCTGCTTCTTTGCCCCCATATCTTGCAAGTGCTGCAATTACAGCTATTGATGTCCTAGATGAAAATCCCAAGCTGATAACAAAGCTGAAGAAAAATATTACATTTTTAAGAAGAGGATTGTCAAAAGTACCAGGCATCACAATTGCAAGTAATCCAGAGTCACCTATTGTTTATTTGAGATTAGAGAAATCAACAGGTTCCGTGAAAGGTGACCTGAATCTGCTTGAAAATATCGCAGAACGGGTTTTGAAGGAAGAATCTGTGTTTGTGGTGGTTTCCAAAAGATCAACATTGGACAAATGCCGTTTGCCTGTAGGAATTAGATTGTTTGTTTCTGCAGGGCATTCAGAGTCCGATCTGCTCAAGGCATCTGAATCATTGAAAAAGGTTGCAGCATCAGTCCTGGGTCGTAATTGA 1461 0.4155 METVMASAVVNFLNATLDWVKFASDGPSARAVVFGVHIGGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPEPLIPSLNKELQYEPPVLESAAGPHTIINGKEVVNFASANYLGFIGHQKLLDSCSSALAKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLENITSKYKKAKNLRRYIVLEAVYQNSGQIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGRGLTEHCGVPVEKIDIITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLDENPKLITKLKKNITFLRRGLSKVPGITIASNPESPIVYLRLEKSTGSVKGDLNLLENIAERVLKEESVFVVVSKRSTLDKCRLPVGIRLFVSAGHSESDLLKASESLKKVAASVLGRN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00288 486 FunFam serine palmitoyltransferase 1 isoform X1 129 370 - -
Pumo9g00288 486 Gene3D Aspartate Aminotransferase, domain 1 108 472 IPR015422 GO:0003824
Pumo9g00288 486 SUPERFAMILY PLP-dependent transferases 85 479 IPR015424 -
Pumo9g00288 486 Gene3D - 129 370 IPR015421 GO:0003824
Pumo9g00288 486 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 40 478 - -
Pumo9g00288 486 Coils Coil 229 249 - -
Pumo9g00288 486 Pfam Aminotransferase class I and II 114 475 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00288 Pumo-Chr9 4640263 4647337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00288 5 339 Acyl Lipid Metabolism Gene Families AT4G36480 78.209 0.0 568