Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00283 ATGTCGTTCAAGCACTTCGCCACTACTGACGAGGCTCGAAAATCGGGGGTTCTACTCAACCTCGACCACTACAACAAGTTGCTCTACCTGTGTTCCGTTGAAAGTGCTGCTGGTGTTCCCCATTTGGGTCTCAAGAGGGGCTTTGAGATTTTCCAGCAGATGCTGAATGACCGAGTTCAGCCCAACGAGGCCACCTTTACCAATGCTGCTAGGCTTGCTGCTGCCAAGGAAGATCCTGACATGGCTTTCGAATTGCTCAAGCAGATGAAGAATGTTGCCATTGCTCCCAAGCTCAGATCCTATGAGCCTGCTTTGTTTGGATTTTGCAAGAGGGGTGATGCTGAGAAGGCTTATCTAGTTGATGCTGACATGATTGAGTCCGGTATTGTGGCCGAAGAGCCCGAGCTTTCTGCTCTTTTGGAAGTCAGTGTCAATGCCAAGAAGGAGGTCAAGGTGTATGAGATTTTGCATCGGTTGCGCGCTACGCTGAGGCAGGTGTCTGAGTCAACTTTGGGGATAGTTGAGGAGTGGTTTAACTCGGAGTATGCTGCAAAAATTGGGAAGGAGAAGTGGGATGTTAGGAAGGTGAGGGAAGGGATTGCGCGGGGAGGTGGAGGATGGCATGGACAAGGGTGGCTTGGGAGTGGGAAATGGAAGGTGGCGAAGACTCAGGTGAACGAGGATGGCGGGTGTCTCTCGTGTGGCGAGAAGCTTGTGAGCATTGATATTGATCCAAAAGAGACTGAAAATTTTGCTGCCTCGTTGTCTAAACTAGCTTGTCAAAAAGAAGCTAAGGCAAACTTTGTTCATTTTCAGAAGTGGCTTGAGCGGTATGGCCCTTTTGATGCTGTTGTAGATGGTGCCAATGTAGGCCTTGCCAATGGGCATAATTTCAGCTTTTCACAGCTTAATACTGTTGTTGAACAATTACGTCAAATAAGCCCTTCAAAGAGATTGCCACTTATAATTTTGCATACAAGTCGGGTACATGGTGGTCCCGCTCAAAATCCAAAAAACAGGAGACTTATTGAAAATTGGAAAAAAAACGGTGCTCTTTATGCTACACCTCAAGGTTCAAATGACGACTGGTATTGGTTATTTGCTGCTGTTAGTTGTAAATGCTTACTGTTAACAAATGACGAGATGAGGGACCACTTGTTCCAACTATTGGGTTCTAGTTTTTTCCCAAGATGGAAGGAAAAGCATCAGGTTCGAACATCAGCCTCATCTTGTGGACTCTCCCTAATTATGCCTCCCCGTTATTCAATAGTTATTCAGGAATCAGCCAATGGTAGTTGGCATGTGCCAACTGTAACTAGTGATGATCATGAGATCCCAAGGAAATGGTTGTGTGCCACAAGATCCAGAAAAAATTCATTACATAATGTATGGACATCTGCCTCCACATCTGATTGTACATGA 1422 0.4592 MSFKHFATTDEARKSGVLLNLDHYNKLLYLCSVESAAGVPHLGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMIESGIVAEEPELSALLEVSVNAKKEVKVYEILHRLRATLRQVSESTLGIVEEWFNSEYAAKIGKEKWDVRKVREGIARGGGGWHGQGWLGSGKWKVAKTQVNEDGGCLSCGEKLVSIDIDPKETENFAASLSKLACQKEAKANFVHFQKWLERYGPFDAVVDGANVGLANGHNFSFSQLNTVVEQLRQISPSKRLPLIILHTSRVHGGPAQNPKNRRLIENWKKNGALYATPQGSNDDWYWLFAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWKEKHQVRTSASSCGLSLIMPPRYSIVIQESANGSWHVPTVTSDDHEIPRKWLCATRSRKNSLHNVWTSASTSDCT 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00283 473 Pfam Protein-only RNase P 225 451 IPR031595 -
Pumo9g00283 473 FunFam Proteinaceous RNase P 1, chloroplastic/mitochondrial 2 248 - -
Pumo9g00283 473 Pfam Pentacotripeptide-repeat region of PRORP 10 184 IPR033443 -
Pumo9g00283 473 CDD PIN_PRORP-Zc3h12a-like 283 405 - -
Pumo9g00283 473 Gene3D Tetratricopeptide repeat domain 7 454 IPR011990 GO:0005515
Pumo9g00283 473 FunFam Proteinaceous RNase P 2 243 417 - -
Pumo9g00283 473 PANTHER UNCHARACTERIZED 9 455 - -
Pumo9g00283 473 Gene3D - 243 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00283 Pumo-Chr9 4613803 4623601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00283 6 152 Miscellaneous Gene Families AT4G11690 25.828 1.62e-07 52.0