Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00240 ATGGCTGCCAGGAGTGATCACCAAACGGTTCCTCTTTCGGTGCTCCTGAAGCGTGAATTGGCGAATGAGAAAATTGAGAAACCTGAGATTGCTCACGGTCAAGCATGCCAGAGCAAGAAAGGGGAGGATTTAACGCTGCTCAAGACGGAATGCCAGAGGATGGTGGGTGATGGGGTCTCCACATATTCCGTTTTTGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAATAATGTTTTAAGCGCGATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCACTGCCTAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAATCTGGAACAACTGTCACCTTTGTGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCGTACTTGAATCTTCTGATGGTGAGCTTTATTACTTGTCTGCAGATCACAGGCTAGAAACAAATGAAGAGGAGAGGGTGCGGATCACCTCTAGCGGTGGTGAAGTTGGTCGGCTAAATACAGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTGTCACGATCTATTGGAGATATGGATATTGGTGAATTTATTGTCCCTGTACCATATGTAAAGCAAGTGAAGCTGTCCACTGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATGCTCTACCTGCAGAAGTAGCCCTTGATTGTTGTCGTGGAATGTCAGCCGATGCTGCTGCACCACATATTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTGTTGATATATTACCTCAAGAGAAGCCACCTGTTTCTGTGGCACCAACAAAGAAGCCAGTAAAGGGAATGCTCAAGTCCATGTTTCGTAAAAAATCTTCTGAATCATCTTCTTATATTGACAAAGAGTACATGGAGCCAGATGTAGTAGAGGAATTGTACGAGGAAGGATCTGCCATGCTTTCAGAGAGGTTAGATACTAAATATCCAGTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTATGTCAAGTAGAGATAAAACCCGGAGAGGGTATTTCAATACACGAGGGTGCACCCAACTCTCAAAAATTTCGTCCCTGGGACGGACCTTTCCTGTGCTCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATCAGGTAGACTTAGCAGTGGAAGTGACGAATGA 1287 0.4476 MAARSDHQTVPLSVLLKRELANEKIEKPEIAHGQACQSKKGEDLTLLKTECQRMVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSDGELYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTAGGRLVICSDGVWDALPAEVALDCCRGMSADAAAPHIVKEAVQAKGLRDDTTCIVVDILPQEKPPVSVAPTKKPVKGMLKSMFRKKSSESSSYIDKEYMEPDVVEELYEEGSAMLSERLDTKYPVCNMFKLFMCAVCQVEIKPGEGISIHEGAPNSQKFRPWDGPFLCSSCQEKKEAMEGKRSSGRLSSGSDE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00240 428 SMART PP2C_4 21 291 IPR001932 -
Pumo9g00240 428 FunFam probable protein phosphatase 2C 12 32 299 - -
Pumo9g00240 428 Pfam Protein phosphatase 2C 54 277 IPR001932 -
Pumo9g00240 428 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722|GO:0006470
Pumo9g00240 428 Gene3D - 30 299 IPR036457 -
Pumo9g00240 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Pumo9g00240 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Pumo9g00240 428 CDD PP2Cc 62 293 IPR001932 -
Pumo9g00240 428 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00240 Pumo-Chr9 3598725 3604699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00240 1 427 PP2C-type Phosphatase Gene Family AT1G47380 79.206 0.0 717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00240 9 3598725 3604699 Pumo9g00240 9 3598725 3604699 ECH
Pumo9g00240 9 3598725 3604699 Pumo5g02499 5 69235163 69238852 PCT