Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00232 ATGGAGAGAGCAAAGTCATCCGTTGAACAAATTCAGCCTCCAACTTATGGAAACTTAGTAACCATTCTTAGCATCGATGGTGGTGGTATTAGGGGCATCATCCCCGCTACCATTATTGCTTTCCTTGAATCTCAGCTTCAGGAATTGGATGGTCCAGATGCAAGGCTTGCAGACTACTTTGATGTGATATCAGGAACAAGCACGGGAGGTCTTGTAACCGCTATGATAACTGCCCCAGACAACAATAATCGACCACTTTTTGCTGCCAAAGATATCAAGCCTTTTTACATGGATCATAGTCCTAAAATTTTCCCACAGCATAGTGGCCTTGGTGCGACGATATTAGCAAAGGTAGTAAGATCTCTGGGAGGACCCAAATATGACGGGAAATACCTGCATGGTGTCGTGAGAGAGAAACTTGGAGACATTCGGTTGCATGAAACCCTCACCAACGTTGTCATTCCCTCTTTCGACATCAAGTCTTTGCAACCCATTATTTTCTCATCTTATCAGATTAAGAATTCCCCTTGCTTTGATGCTAAGCTCTCAGACATATGCATCAGCACGTCCGCGGCACCTACTTATCTCCCTGCCCACAATTTCAACAACCAAGATTCAAATGGGAACGTGCACGAATTCAACCTCATTGATGGTGGCGTTTGTGCAAATAACCCGACCTTAGTTGCGATGAACGAAGTAACAAAGCAAATCATTAAGCAAAATACTGATTTCTTTCCAATCAAGCCTCTGGAATATGGTCGCTTCCTAATAATTTCAATTGGGACCGGGACAGCGAAAAATGAGGAAAAATTCAATGCACAAATGGCAGCCAAATGGGGGTTATTGGATTGGCTAACCCAAAGTGGTAGTACTCCCTTAATTGACGTTTTCACTCAATCCAGTGCAGATATGGTGGATTTCCATTTATCTGCTGTCACTCAAGCACTTCATTCAGAAGATAATTACCTTCGAATACAGGATGACACATTGACTGGAACGGATTCTTCAGTTGACATTGCTACAAAGGAGAACTTGGAGAAACTTTGCCAAATTGGAGAAAATCTGCTAAAGAAACCAGTCTCTAGGGTCAATTTAGAGAATGGTCTCTTTGAGCCACTGAAAAATGGGGGAACCAATGAAGATGCTCTCAAAAGGTTTGCAAAAATACTTTCACAAGAGAGGAGTCTCCGTGACATGAGATCCCCGCACACTAAAAAGGCCTTCTAG 1227 0.4287 MERAKSSVEQIQPPTYGNLVTILSIDGGGIRGIIPATIIAFLESQLQELDGPDARLADYFDVISGTSTGGLVTAMITAPDNNNRPLFAAKDIKPFYMDHSPKIFPQHSGLGATILAKVVRSLGGPKYDGKYLHGVVREKLGDIRLHETLTNVVIPSFDIKSLQPIIFSSYQIKNSPCFDAKLSDICISTSAAPTYLPAHNFNNQDSNGNVHEFNLIDGGVCANNPTLVAMNEVTKQIIKQNTDFFPIKPLEYGRFLIISIGTGTAKNEEKFNAQMAAKWGLLDWLTQSGSTPLIDVFTQSSADMVDFHLSAVTQALHSEDNYLRIQDDTLTGTDSSVDIATKENLEKLCQIGENLLKKPVSRVNLENGLFEPLKNGGTNEDALKRFAKILSQERSLRDMRSPHTKKAF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00232 408 FunFam Patatin 12 402 - -
Pumo9g00232 408 Pfam Patatin-like phospholipase 23 230 IPR002641 GO:0006629
Pumo9g00232 408 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 230 IPR002641 GO:0006629
Pumo9g00232 408 SUPERFAMILY FabD/lysophospholipase-like 18 368 IPR016035 -
Pumo9g00232 408 PANTHER XYLOSE ISOMERASE 5 398 - -
Pumo9g00232 408 CDD Pat17_isozyme_like 17 368 - -
Pumo9g00232 408 Gene3D Cytosolic phospholipase A2 catalytic domain 9 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00232 Pumo-Chr9 3440601 3443310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00232 11 405 Miscellaneous Gene Families AT2G26560 66.414 0.0 535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00232 9 3440601 3443310 Pumo9g00232 9 3440601 3443310 ECH