Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00230 ATGGAAGCAACGAAAGAACTTGTATCTCCAACTCCATGCATAAGTGATGATGGACACCTAGTTACCGTGCTTAGTATTGATGGTGGCGGCATTCGGGGAATCATTCCAGGAATTATACTTGGTTTCCTCGAATCAGAGCTTCAGAAGCTGGATGGTGATCATGTAAGATTGGCAGACTACTTTGATGTGATTGCAGGAACAAGTACTGGAGGATTAGTGACTGCAATGCTTACTGCTCCAAATGAAAATAACCGACCCTTGTATGCAGCCAAAGATATTAAGGATTTCTACCTTGAGCATGGCCCAAAAATTTTCCCACAAAATAAGTGCTGGAATTTATTCTCATCTATCGTTAAGTTCAGCAGAACTCTGTTTGGACCACAGTACAATGGCAAGTATTTACACGGGCTTATTAGGGAAAAACTAGGAGACTTAAAATTGCACCAAACATTGACCAATGTGGTCATCCCAGCATTTGACATCAAGCGCCTTCAACCCACCATCTTTTCCAGCTTCCAGCTGAAGAAGAGGCCAGATTTGAATGGCTTGTTGTCGGATATATGCATTTCAACTTCGGCAGCTCCAACATATCTTCCAGCTCATTCCTTTGAAACCAAAACCCACCATGGTCATGTCATGGCCAAATTCGACCTTATAGACGGTGGCGTGGCTGCAAATAACCCGGCTCTGGTAGCCATGGCAGAAGTGACGAACCAAATTTGCCATGAGGGGCCATGTGATAGCTTAAATGTGGAACCGATGCAATACGATCGATTTTTGGTGATATCATTGGGAACAGGTTCTCAGAAACAGGAAATGAAATACAGTGCTGATGAGGCAGCTCAATGGGGCATCTTGAGTTGGGTATCCACAACCAATGGTGGCACCCCTTTGATTGATGCCTTTAGTCAAGCCAGTGCTGACATGGTTGACTTTCACATCTCTTCCGTTGTTCGAGCACTCAATTCTGAACATAACTACCTCCGAATCCAGGACGATACATTAACTGGGGACTTATCTTCTGTTGACATGGCCACGGAGAAGAATTTGAATGATCTCGTCAAAGTTGGGGAATCATTGTTAAAGAAACCGGTTTCAAAGATTAACTTGAAGACTGGCGTTTACGAACCTGCTAAATCTTATGAAAAAAATGAAGAGGCCCTGAAGAGGTTTGCGGAACGACTATCCAAGCAGAGGCAATTTCGTAAATCTCAAATGTCTGCCAATGGGAATCTTTAG 1239 0.435 MEATKELVSPTPCISDDGHLVTVLSIDGGGIRGIIPGIILGFLESELQKLDGDHVRLADYFDVIAGTSTGGLVTAMLTAPNENNRPLYAAKDIKDFYLEHGPKIFPQNKCWNLFSSIVKFSRTLFGPQYNGKYLHGLIREKLGDLKLHQTLTNVVIPAFDIKRLQPTIFSSFQLKKRPDLNGLLSDICISTSAAPTYLPAHSFETKTHHGHVMAKFDLIDGGVAANNPALVAMAEVTNQICHEGPCDSLNVEPMQYDRFLVISLGTGSQKQEMKYSADEAAQWGILSWVSTTNGGTPLIDAFSQASADMVDFHISSVVRALNSEHNYLRIQDDTLTGDLSSVDMATEKNLNDLVKVGESLLKKPVSKINLKTGVYEPAKSYEKNEEALKRFAERLSKQRQFRKSQMSANGNL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00230 412 PANTHER XYLOSE ISOMERASE 16 404 - -
Pumo9g00230 412 SUPERFAMILY FabD/lysophospholipase-like 21 378 IPR016035 -
Pumo9g00230 412 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 233 IPR002641 GO:0006629
Pumo9g00230 412 FunFam Patatin 13 407 - -
Pumo9g00230 412 Coils Coil 378 398 - -
Pumo9g00230 412 Gene3D Cytosolic phospholipase A2 catalytic domain 13 408 - -
Pumo9g00230 412 Pfam Patatin-like phospholipase 24 233 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00230 Pumo-Chr9 3417310 3420310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00230 18 402 Miscellaneous Gene Families AT2G26560 63.472 1.14e-168 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00230 9 3417310 3420310 Pumo9g00230 9 3417310 3420310 ECH