Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00201 ATGGCCCTGAACGACTTTTTCGCGGGGGAGATCGCGACGGAGCTTCTGAAAATGCTGATAAACATCTCCAGGAAGTCCCTCCTCTGCCGCGCCAGCGCCGACCAGCTCATCACCTACATCCACGACCTCCTCCCGACGATCGAGGAGATCAAGTACTCCGGCATCGAGCTCCCGGCGCAGCGCCAGTCCCAGCTTGATCGTCTCTCCGAGATTCTCCGCTCCGGCGTCGAGCTCTCCCACAAGGTTCTCTCCGCCAGCCGCTGGAACGTCTACCGCAACCTCCACCTTGCGAAAAAAATGGAGAAGCTCGAGAAGAACGTTTCGAAGTTTTTGTTGGGCCCCATGCAGGCCCATATCATGGCGGATATCCACCACACCCGGTTCGAGATGGCCGAGCGGTTCGACCGGGTTGATAACTCGGTTCGACGCTTGGAGAACTACTTCGGGAATATGAAGATTGGCGTTGGCGGCGGAGGGTGGGTGGAGGAGGCTGTCAGGAGCATGGACGAGGATGTTGTTGATACTAGCTCTGCTCTCGGGTTGGGTTTCGGGAAGAATAAGGTTAGGGAGATGGTTGTCGGGAGAGAGGATCTTTGGCTTGTCGGGATTTCTGGGATTGGTGGCTCCGGGAAGACCACTCTCGCCAGAGAGCTCTGCAAAGATGATCAAATTAGATGTTATTTTAGGGATAGGATTTTGTTCCTGACTGTGTCGCAGTCACCGAAAGTGGAGCAGCTAAGGACGAAGATTTGGGGGTATATTATGGGCAACGAGAGGTTGAATGCGAATTATGTGGTTCCGCAGTGTATGCCACAGTTTGAGTGCAGAAGCGAAGCTCGAACTCTGATTGTTTTGGATGATGTGTGGACACTCTCCGTGGTGGAGCAGCTTGTGTATAGAATACCCGGTTGCAAGTTTCTTGTGGTGTCCAGGTCTAAATTCCAAACGGTGTTGAGTTATGAAGTGGAATTGCTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGCCACCATGCTTTTGGACAGAAATCAATCCCTTTAGCTGCTAATGAGAATTTGGTCAAGCAGGTTGTGACTGAGTGTGGAAGGCTTCCCTTGGCTCTTAAGGTAATTGGAGCTTCTTTGCGAGATCAGACTGAGATGTTTTGGATGAGTGTTAAAAACAGGCTATCTCAAGGCCAAAGTATTGGGGAATCCCATGAAATCAATCTGATTGAAAGAATGGCAATTAGTATCAATTACCTTCCAGAGAAGATCAAGGAGTGCTTCTTGGACCTGTGTTGTTTTCCTGAGGATAAGAAAATCCCTCTGGATGTTCTCATCAATATGTGGGTGGAAATCCATGATATTCCTGAAACAGAAGCTTATGCCATTGTGGTTGAGCTCTCCAACAAAAATCTTCTCACCTTAATGAAAGAGGCGCGAGCTGGAGGCATGTATAGCAGTTGCTTTGAAATCTCAGTTACTCAACATGATGTACTGAGAGACCTAGCCCTGAATTTGAGCAACCGTGCGAGCATTGATGAACTCCGGCGATTAGTTATGCCAAAACGAGAGAATGGAATGCCTAAAGAGTGGTTGAGATACAAGCACAAGCCATTTGAGGCTCAGATTGTTTCAATTCACACAGGTGAAATGAAAGAAGTGGACTGGTGTAATCTTGAATTTCCAAAGGCTGAAGTGCTGATTATTAATTTCACATCCACTGAATACTTCTTGCCTCCTTTCATCAATAGAATGCCAAACTTGAGGGCATTGATAATAATAAACTACAGTGCAACATATGCTAGTCTTCACAATGTTTCAGTTTTCAAGCATTTGTCCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTTCACCCCAGAGTTATCAAGCATTGTCTTGGAAAACTTGGGAAAATTATTTATTGTCCTCTGCAAAGTTAATAACAGTTTGGTGGAAAAGGAGGCAGCAGACTTGGCTCAAGTCTTCCCTAATCTCTTTGAGCTCACTCTTGATCACTGTGATGATCTAACCCAATTGCCCTCAAGCATTTGTGGAATGAAGTCACTCCAAAACTTGAGTCTCACCAACTGCCACAATTTGACTCAATTGCCAGTTGAACTAGGCAAACTAAGATCTCTAGAGATCCTACGTTTATATGCTTGTCCTGATCTGAAAACACTTCCTAATAGCATCTGTGACATGATGAGGTTGAAGTATATTGACATTTCTCAATGTGTTAACCTCACATGCTTCCCTGAAGAGATTGGTAGACTAGTAAGCTTGGAGAAGATTGACATGAGGGAATGCTCCATGATTAGAAATGTGCCAAAGTCTGCAGTGTCATTGCAATCTCTGAGGCTTGTAATTTGTGACGAGGAGGTATCTGGGATTTGGAAAGAGGTTGAGAAGGCCAAGCCTAATAATGTGCATATTCAAGTATCAGAGCAGTACTTTGATTTGGACTGGCTCAAAGAGTGA 2460 0.461 MALNDFFAGEIATELLKMLINISRKSLLCRASADQLITYIHDLLPTIEEIKYSGIELPAQRQSQLDRLSEILRSGVELSHKVLSASRWNVYRNLHLAKKMEKLEKNVSKFLLGPMQAHIMADIHHTRFEMAERFDRVDNSVRRLENYFGNMKIGVGGGGWVEEAVRSMDEDVVDTSSALGLGFGKNKVREMVVGREDLWLVGISGIGGSGKTTLARELCKDDQIRCYFRDRILFLTVSQSPKVEQLRTKIWGYIMGNERLNANYVVPQCMPQFECRSEARTLIVLDDVWTLSVVEQLVYRIPGCKFLVVSRSKFQTVLSYEVELLSEEDALSLFCHHAFGQKSIPLAANENLVKQVVTECGRLPLALKVIGASLRDQTEMFWMSVKNRLSQGQSIGESHEINLIERMAISINYLPEKIKECFLDLCCFPEDKKIPLDVLINMWVEIHDIPETEAYAIVVELSNKNLLTLMKEARAGGMYSSCFEISVTQHDVLRDLALNLSNRASIDELRRLVMPKRENGMPKEWLRYKHKPFEAQIVSIHTGEMKEVDWCNLEFPKAEVLIINFTSTEYFLPPFINRMPNLRALIIINYSATYASLHNVSVFKHLSNLRSLWLEKVFTPELSSIVLENLGKLFIVLCKVNNSLVEKEAADLAQVFPNLFELTLDHCDDLTQLPSSICGMKSLQNLSLTNCHNLTQLPVELGKLRSLEILRLYACPDLKTLPNSICDMMRLKYIDISQCVNLTCFPEEIGRLVSLEKIDMRECSMIRNVPKSAVSLQSLRLVICDEEVSGIWKEVEKAKPNNVHIQVSEQYFDLDWLKE 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00201 819 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Pumo9g00201 819 Gene3D - 407 496 IPR036388 -
Pumo9g00201 819 Gene3D Ribonuclease Inhibitor 521 802 IPR032675 -
Pumo9g00201 819 Gene3D - 324 406 IPR042197 -
Pumo9g00201 819 Pfam NB-ARC domain 187 403 IPR002182 GO:0043531
Pumo9g00201 819 SUPERFAMILY RNI-like 555 783 - -
Pumo9g00201 819 Gene3D - 178 320 IPR027417 -
Pumo9g00201 819 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 817 IPR039203 GO:0050832
Pumo9g00201 819 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
Pumo9g00201 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 425 IPR027417 -
Pumo9g00201 819 PRINTS Disease resistance protein signature 200 215 - -
Pumo9g00201 819 PRINTS Disease resistance protein signature 360 374 - -
Pumo9g00201 819 PRINTS Disease resistance protein signature 678 694 - -
Pumo9g00201 819 PRINTS Disease resistance protein signature 275 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00201 Pumo-Chr9 2908051 2911202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00201 197 747 WRKY Transcription Factor Family AT5G45050 22.241 3.72e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00201 9 2908051 2911202 Pumo9g00201 9 2908051 2911202 ECH