Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00200 ATGGTCATAACGGAATTCTTCCAGGGCGAGATCTCGTCGGAGCTATGGAAAATGCTGGTGTCAATTTCCCGAAAAGCCCTCCGCTGCAAGTCCAGCGCGGAGAGCCTCATCACCTACGTCCGCGAGCTCCTTCCGACGATCGAAGAGATCAAATACTCCGGCGTGGAGCTGCCGGCGCCGCGGCAGTCGCAGCTGGACCGCCTCTCGGAGATCCTCCGCTCCGGCGTCGAGCTCTCGCACCAGGCACTCTCCTCCTCGCGCTGGAACGTGTACCGCAACTTCCAGCTGGCGAAAAAAATGGAGAAGCTCGAGAAGCACGTGACGCGGTTCTTGCAGGTTCCCATGCAGGCGCATATTCTGGCCGACGTGCATCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGTCGAACCGGAGGATGGAGCGGTTGATCGGGGAGATGAAGATTGGGGTGAACGGGGGCGGGTGGGTGGAGGAGGCTGTGAGGACTATGCAGGAGGATGAGACATGGGTTGAGGGGTGTAATGGGAATAATAGTTTTGGGGTTGGGTTGGACTTCGGGAAGAACAAGGTTATGGAGATGATTTTTACGAGGAGTGATGTTTCGATTGTCGGGATTTGCGGGATTGGTGGGTCCGGGAAAACCACTCTTGTTAGAGAGGTCTGCAGGGATGACCAAGTGAGATGTTATTTCAAGGACAGGATCTTGTTTTTGACTGTGTCGCAGTCCCCGAACGTGGAGCAGCTGAGAGCGAGGATCTGGGGACACATCATGGGCAGCCAAGGTTTGAATGGCAATTATGCGGTTCCGCAATGGATGCCACAGTTTGAGTGCAAAGGGGAAGCTCAAGTTCTTGTTGTTCTTGATGATGTGTGGTCTCTCTCCGTGCTGGAGCAGCTTGTGCAGAAAACTCCTGGCTGCAAATTCCTTGTGGTGTCCAGATTTAACTTCCCAACAATTTTTAATGCCACTTATCATGTGGAATTACTGGGTGAACAGGATGCCCTTTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCTTTGGGTTCTAATGTGAGTTTGGTCAAGCAGGTTGTGGCTGAGTGTGGAAGGCTTCCACTGGCTCTGAAGGTGATCGGAGCTTCTTTGCGAGACCAGAATGAAATGTTTTGGTTGAGTGTTAAAAACAGGCTCTCTCAAGGTCAAAGCATTGGTGAATCCTATGAAATCAATCTGATTGATAGAATGGGAATTAGTACTAACTACCTGCCAGAAAAGATTAAGGAGTGCTTCTTGGACCTGTGTTCTTTTCCTGAGGATAGAAAGATTCCTCTAGAAGTTCTAATCAATATGTGGGTTGAAATCCATGACATCCATGAAACGGAAGCATATGCCATTGTGGTTGAGCTTTCAAACAAGAATCTTCTCACCTTAGTAAAAGAGGCACGTGTCGGGGGCATGTATAGCAGTTGCTTTGAGATTTCTGTCACTCAACATGATATATTGAGGGACCTTGCTCTTAATTTGAGCAACCGTGGCAGCATTCATCAACACCGAAGGCTAGTTATGGCAAAACGAGAAGAAAATGGACTACTCCCCAAAGAATGGTCTAGATACAAGGACCAACCCTTTGAAGCACAGATTGTTTCAATCAACACAGGTGAAATGACCAAAATGGACTGGTTTGAACTGGATTTTCCAAAGGCTGAAGTGTTGATCATTAATTTCACATCCAGTGATTACTTTTTACCTCCCTTCATCAATAAAATGCCAAATTTGAGGGCATTGATAATAATAAACCACAGTACCGCATATGCCCGCCTTCACAATGTTTCAGTTTTTAGGAATTTGACCAACTTGAGGAGTCTCTGGCTTGAAAAGGTTTCCATCCCTCAGTTATCAGGCACTGTCTTGCAAAACTTGGGCAAATTATTTGTAGTCCTCTGCAAGATTAACAATAGTTTGGATGGGAAACAGTTCCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGCTGATCTAACTCAATTGCCCTCAAGCATTTGTGGAATAAAGTCACTGCAAAACTTGAGTCTCACCAACTGCCACAATTTGAGTCAACTACCTGGTGAATTTGGCAAACTAAAATCACTAGAGATCCTCCGGTTATATGCTTGTCCAGATCTAGAAACACTTCCTCCTAGCATGTGTGACATGAAGAGATTGAAGTATATTGATATTTCTCAATGTGTTAACCTCACATGCTTCCCTGAAGAGATTGGTAGATTAGTAAGCTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCAAAGTCTGCAGTGTCATTGCAATCTCTGCAGCTTGTAATTTGTGATGAGGAGGTATATGGTATGTGGAGAGATGTTGAGATGGCCAAGCCAAATGTCCATATTCAAGTAGCAGAACAGCACTTTGATCTGGACTGGCTTCAAGAATGA 2469 0.4666 MVITEFFQGEISSELWKMLVSISRKALRCKSSAESLITYVRELLPTIEEIKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADVHHVRFEMAERFDRVEASNRRMERLIGEMKIGVNGGGWVEEAVRTMQEDETWVEGCNGNNSFGVGLDFGKNKVMEMIFTRSDVSIVGICGIGGSGKTTLVREVCRDDQVRCYFKDRILFLTVSQSPNVEQLRARIWGHIMGSQGLNGNYAVPQWMPQFECKGEAQVLVVLDDVWSLSVLEQLVQKTPGCKFLVVSRFNFPTIFNATYHVELLGEQDALSLFCHHAFGQKSIPLGSNVSLVKQVVAECGRLPLALKVIGASLRDQNEMFWLSVKNRLSQGQSIGESYEINLIDRMGISTNYLPEKIKECFLDLCSFPEDRKIPLEVLINMWVEIHDIHETEAYAIVVELSNKNLLTLVKEARVGGMYSSCFEISVTQHDILRDLALNLSNRGSIHQHRRLVMAKREENGLLPKEWSRYKDQPFEAQIVSINTGEMTKMDWFELDFPKAEVLIINFTSSDYFLPPFINKMPNLRALIIINHSTAYARLHNVSVFRNLTNLRSLWLEKVSIPQLSGTVLQNLGKLFVVLCKINNSLDGKQFPNLSELTLDHCADLTQLPSSICGIKSLQNLSLTNCHNLSQLPGEFGKLKSLEILRLYACPDLETLPPSMCDMKRLKYIDISQCVNLTCFPEEIGRLVSLEKIDMRECPMIRYLPKSAVSLQSLQLVICDEEVYGMWRDVEMAKPNVHIQVAEQHFDLDWLQE 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00200 822 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Pumo9g00200 822 Gene3D - 334 412 IPR042197 -
Pumo9g00200 822 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 11 133 IPR008808 -
Pumo9g00200 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 434 IPR027417 -
Pumo9g00200 822 Pfam NB-ARC domain 192 410 IPR002182 GO:0043531
Pumo9g00200 822 Gene3D - 169 322 IPR027417 -
Pumo9g00200 822 SUPERFAMILY RNI-like 567 785 - -
Pumo9g00200 822 Gene3D - 415 505 IPR036388 -
Pumo9g00200 822 PRINTS Disease resistance protein signature 369 383 - -
Pumo9g00200 822 PRINTS Disease resistance protein signature 282 296 - -
Pumo9g00200 822 PRINTS Disease resistance protein signature 730 746 - -
Pumo9g00200 822 PRINTS Disease resistance protein signature 207 222 - -
Pumo9g00200 822 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 4 820 IPR039203 GO:0050832
Pumo9g00200 822 Gene3D Ribonuclease Inhibitor 535 803 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00200 Pumo-Chr9 2899844 2904138 Wgd