Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00176 ATGGCCCTAAACCCAAACTCAAAATCCTCTTCACTCTTCCACCTGCTCCTCTTTTTATTAGGCAATGTAGCATATGCCACAGTGTTTACCTTGGAGAATCATTGCGGTCACACAGTTTGGCCAGGGACACTTTCCGGCAACGGCGCCGCCGTTCTCGGCGACGGCGGTTTCGCCCTGGCGCCGGGTTCGTCGGTCCAGCTCACCGCACCGTCGGGCTGGTCCGGCCGCTTCTGGGCCCGGACCGGGTGCAGCTTCGACGGCTCCGGCATCGGAAAATGCGCCACCGGAGACTGCGCCGGCGGACTGAGGTGCAACGGCGGAGGTGTCCCGCCGGTGACGCTGGCGGAGTTCACTGTCGGAACCGCCGGTAACGGCAACAAGGACTTCTACGACGTGAGCCTGGTGGACGGTTACAATGTGGGCATGGGAGTGCGGGCTACCGGCGGAACCGGTGACTGTCAGTACGCGGGGTGCGTGGCGGACCTGAACGGCGCGTGTCCGGCGGAGCTGCAGGTCAGGGACGGCGGCGGCGCGGTGGTGGCGTGCAAGAGCGCGTGCGCGGCGTTCAACACGGCGGAGTATTGCTGCACCGGCGACCACTCGACGCCGCATACGTGTTCGCCGACACATTATTCGGAGATATTCAAGAATGCGTGTCCCACAGCGTACAGTTACGCTTACGATGATGCTTCGAGCACTTGCACCTGTTCTGGATCTAATTACCGTATCACATTTTGCCCCAATTAA 747 0.6145 MALNPNSKSSSLFHLLLFLLGNVAYATVFTLENHCGHTVWPGTLSGNGAAVLGDGGFALAPGSSVQLTAPSGWSGRFWARTGCSFDGSGIGKCATGDCAGGLRCNGGGVPPVTLAEFTVGTAGNGNKDFYDVSLVDGYNVGMGVRATGGTGDCQYAGCVADLNGACPAELQVRDGGGAVVACKSACAAFNTAEYCCTGDHSTPHTCSPTHYSEIFKNACPTAYSYAYDDASSTCTCSGSNYRITFCPN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00176 248 Gene3D Thaumatin 27 247 IPR037176 -
Pumo9g00176 248 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Pumo9g00176 248 PIRSF PR5 2 248 IPR001938 -
Pumo9g00176 248 ProSiteProfiles Thaumatin family profile. 26 248 IPR001938 -
Pumo9g00176 248 FunFam Thaumatin-like protein 1a 27 247 - -
Pumo9g00176 248 CDD TLP-PA 28 246 - -
Pumo9g00176 248 SMART tha2 29 247 IPR001938 -
Pumo9g00176 248 Pfam Thaumatin family 33 247 IPR001938 -
Pumo9g00176 248 SUPERFAMILY Osmotin, thaumatin-like protein 28 248 IPR037176 -
Pumo9g00176 248 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Pumo9g00176 248 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Pumo9g00176 248 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Pumo9g00176 248 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Pumo9g00176 248 PANTHER OS03G0233200 PROTEIN 16 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00176 Pumo-Chr9 2428076 2429519 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00176 9 2428076 2429519 Pumo9g00176 9 2428076 2429519 ECH