Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00173 ATGCTCCGATCGAGGAATCGCTGGCGGCTTGATGGAAACGGCGCCGTTTGCGCTTCGGTGTTCGCCATTCCATGGAGTTCATGGTTCGGTGTTGTAGTTCGTGCGCGCTATCCAGATTTCGTTTTAGCCTTGGATTCGCCGTCGTTGTTTTCGAGGTCGACTCTGCTACTTCGCGAGTTTATGAATATTTTTGTCAACAATGCAAAGCTCCAAGAACACCAATTTCAATGGGGAGGTTTGGAAGGGAGGATTGAGAACATTGCCTCACACTCTTGCATACATGACCAGATACTTGAACAGAGAAAGCGACCTGGTCGCAAGGTGTATTCAGTTACCCCACAGGTGTATGAGCCTGGTCTCTCGAAACCCCTCCAGCATAAAGGTAGGGCGTTACTTGGTGTATCAACATCATCGGAGTCGCAAGGGAATGAAAAGCAACCTATTAGGATATATCTAAATTATGATGCTGTTGGTCACTCCCCTGACAGGGATTGTCAAAAAATTGGTGATATTGTCAAGCTTGGGGAGCCTCCCATGACTTCTCTTCCTGGTTTGCCTTCTTGTAATCCTCTTGCTGATCCTCCAGTCTTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAACATCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGACAGCATTGTCTGTTGAGCCTGTCAAGGGAAACTTGAGATTAAGTGGGTACTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCTCATGAATATGTTGAAGAGGGAGTCTCTGATGCCGACTTAGTTCTCTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCTTGGGCTGTGGCATGTGAACGGGACCAATGGGGCCGTGCTATAGCTGGACATGTTAATGTTGCTCCTCGTCATTTGACAGCTGAAGCAGAGACTTTACTTTCAGCTACTCTGATACATGAGGTTATGCATGTTCTTGGTTTCGATCCTCATGCCTTTGCTCATTTTAGAGATGAAAGAAAAAGACGCCGTAATAAGGTTACCGAACAAGTAATGGATGAAAAGATTGGGCGGATGGTAACACGTGTGGTGCTTCCACGTGTTGTCATGCATTCTCGACATCATTATGCGGCATTCTCAGGAAATTTTACTGGCTTAGAGCTGGAAGATGGTGGAGGACGCGGCACATCAGGGTCTCACTGGGAAAAGAGACTTCTGATGAATGAGATCATGACTGGTTCTGTGGATACAAGATCCGTAGTTTCAAAAATGACACTAGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGACTTGATTGGGGTCGTAACCAGGGTACTGAGTTTGTTTCCTCCCCTTGCAATCTATGGAAAGGGGCCTATCATTGCAACACAACACAGTTCTCTGGTTGTACGTATAACAGAGAGGCAGAGGGTTACTGCCCAATTCTAACCTACAGCGGAGACCTTCCTCAGTGGGCTCAGTATTTTCCTCAAGCTAATAAAGGAGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGACACTAGCAGTGCACGGGCGCCTGATAGAATGCTAGGTGAAGTTCGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGAGGTTCTCTGACCCAGGGAAATGGTTGTTATCAGCACAGGTGTATCAACAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCAGGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATATCATGAGCTCTGTAACACAGATCCAGTGGTCGTGTCTGGGCAATGTCCCAGTGCATGTGCCACTGCTTTCTTGGATTTCATGGTCATGATTGCAGTAGACGTTCCTGCCCCAGCGATTGCACTGGCAATGGCATGTGCCTCTCCAGTGGAATATGTGAATGTAAAACTGGCTATACTGGCATTGACTGTTCCACTGCTGTTTGTGATGAGCAATGCAGCCTTCATGGCGGGGTTTGTGATGAATGGAGTTTGCGAATTTCGCTGTTCTGACTATGCGGGATACACTTGCCAGAACAGCTCCTTGCTCCTCTCCAGTCTTTCAGTTTGCAGAAATGTGCTGGGAAACGATATTTCTGGGCAGCATTGTGCTCCCAGTGAATCTAGCATACTACAGCAGCTTGAAGAAGTGGTTGTCATGCCCAACTACCATAGATTATTTCCTGGTGGTGCTAGGAAACTATTTAATATATTTGGCAGCACCTACTGTGATGAGGCAGCTAAAAGGCTTGCATGCTGGATTTCAATCCAAAAGTGTGAGAATGATGGAGACAACAGGCTACGAGTATGTCATTCTGCATGTCAGGCTTATAATCTAGCATGTGGAGCTTCACTGGACTGCAGTGACCAAACCCTTTTCAGTGGCGACGGGGAGGGTGAGGGTCAGTGCACTGGCTCTGGTGAGATGAAATTGTCATGGTTTAATCGACTGAGAAATAGTTTTTCTTTGAGAAACAGTTCCTCCAAAGGAATATCTGTAAGATATAGGCAGCTTTAG 2637 0.463 MLRSRNRWRLDGNGAVCASVFAIPWSSWFGVVVRARYPDFVLALDSPSLFSRSTLLLREFMNIFVNNAKLQEHQFQWGGLEGRIENIASHSCIHDQILEQRKRPGRKVYSVTPQVYEPGLSKPLQHKGRALLGVSTSSESQGNEKQPIRIYLNYDAVGHSPDRDCQKIGDIVKLGEPPMTSLPGLPSCNPLADPPVFGDCWYNCTSEDISGEDKKHRLRKALGQTADWFRTALSVEPVKGNLRLSGYSACGQDGGVQLPHEYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNKVTEQVMDEKIGRMVTRVVLPRVVMHSRHHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVSSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSLTQGNGCYQHRCINNSLEVAVDGIWKVCPQAGGPIQFPGFNGELICPAYHELCNTDPVVVSGQCPSACATAFLDFMVMIAVDVPAPAIALAMACASPVEYVNVKLAILALTVPLLFVMSNAAFMAGFVMNGVCEFRCSDYAGYTCQNSSLLLSSLSVCRNVLGNDISGQHCAPSESSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCENDGDNRLRVCHSACQAYNLACGASLDCSDQTLFSGDGEGEGQCTGSGEMKLSWFNRLRNSFSLRNSSSKGISVRYRQL 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00173 878 PRINTS Leishmanolysin (M8) metalloprotease family signature 276 305 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Pumo9g00173 878 PRINTS Leishmanolysin (M8) metalloprotease family signature 429 458 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Pumo9g00173 878 FunFam leishmanolysin-like isoform X2 530 625 - -
Pumo9g00173 878 FunFam Peptidase M8, leishmanolysin 141 331 - -
Pumo9g00173 878 FunFam leishmanolysin-like peptidase isoform X2 342 466 - -
Pumo9g00173 878 Gene3D Leishmanolysin , domain 2 341 466 - -
Pumo9g00173 878 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 84 835 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Pumo9g00173 878 Gene3D Leishmanolysin domain 4 530 625 - -
Pumo9g00173 878 FunFam leishmanolysin-like peptidase isoform X2 469 528 - -
Pumo9g00173 878 Gene3D - 141 331 - -
Pumo9g00173 878 Pfam Leishmanolysin 202 627 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Pumo9g00173 878 Gene3D Leishmanolysin domain 3 470 528 - -
Pumo9g00173 878 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 141 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00173 Pumo-Chr9 2403599 2411509 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00173 9 2403599 2411509 Pumo9g00173 9 2403599 2411509 ECH