Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00170 ATGGCCTCCGACGGAGCAACCTCGGCGGCGGCGACGAGCCGGAGAAAGCCGTCGTGGAGAGAAAGAGAGAACAACAGAAGAAGAGAACGAAGGAGAAGAGCAATAGCGGCGAAAATATACTCAGGACTTCGAGCTCAGGGGAACTTCAACTTGCCAAAGCACTGTGACAACAACGAAGTTCTGAAAGCTCTTTGCGCAGAAGCTGGTTGGTGCGTCGAAGAAGACGGAACCACTTACCGCAAGGGTTGCAAGCTTCCTCTGGCCAATGGTGCAGGGAGTTCCATGAGAAACATTCCCTTTTCTTCTTCACAAAATCCAAGTCCTCTTTCTTCGTCGTTTCCCAGCCCAATTCCTTCATACCAAGTGAGCCCTTCCTCCTCCTCTTTCCCGAGCCCGTTTCGTTTAGATGGGGATAAGGACAATGTATCAAACCTCATTCCATACATTCACAATGCGTCCTTGTCTCTTCCTCCTCTCAGGATATCAAACAGTGCCCCTGTGACGCCACCTCTTTCATCACCAACATCAAGAAATCCAAAACCAATTCCTACATGGGAGTCTATTGCCAAAGAATCCATGGCCTCCTTCAATTACCCTTTCTTTGCAGCTTCTGCCCCTGCTAGCCCCACGCACCGTCACCTTTACACCCCGGCCACTATTCCAGAATGCGATGAGTCTGATACTTCCACCGGTGAGTCTGGCCAGTGGGTGAAATTCCAAGCATTTGCTCCTTCTGCATCTGTGTTTCCAACTTCTCCAACCTTCAATTTTGTTAAACCTGTGGTTCCGCACAGGGTGCCTGATAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAAAAAATTCATGAAGTGGCATTGGATGAGTTGGAGCTCACACTTGGAAGTGGGAAGGTGCGGAGTTAG 939 0.4973 MASDGATSAAATSRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGCKLPLANGAGSSMRNIPFSSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPFRLDGDKDNVSNLIPYIHNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPFFAASAPASPTHRHLYTPATIPECDESDTSTGESGQWVKFQAFAPSASVFPTSPTFNFVKPVVPHRVPDNSIQEMRTSSEEFGVQVKPWVGEKIHEVALDELELTLGSGKVRS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00170 312 MobiDBLite consensus disorder prediction 94 134 - -
Pumo9g00170 312 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 151 IPR008540 -
Pumo9g00170 312 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 10 311 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pumo9g00170 312 MobiDBLite consensus disorder prediction 1 30 - -
Pumo9g00170 312 MobiDBLite consensus disorder prediction 94 132 - -
Pumo9g00170 312 MobiDBLite consensus disorder prediction 15 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00170 Pumo-Chr9 2332380 2335836 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pumo9g00170 BES1_N 9.6e-60 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00170 9 2332380 2335836 Pumo9g00170 9 2332380 2335836 ECH