LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g00154	ATGCCTCATTTGCGAGCTAAAGCCCGGCCACCACCTGGGTTTTCTGCACCAAAACCGAATGACTTTACAGATGTTCCTGGCCGGCAAATTTCCGGTACTTTTGGGAATACCCTTGCTGGTTTGAATGAGGTTGACATTTTGAGAAGTGATTCTAGGCATAGGCAGAGTTCGGATACCGAAGCTGAAAATAGGTTTCTGGAGTCCCTCATGTCTGGTAACAAGAACAGTCCTCCCCTTGATAGCCTGACATTATCAGAAGGTTTACAAGGGTTTGTTGGAAATAATCCTGGTAATATGGGCCCATCAGGAGTTGATAGTGGAAATAATCTTTACTTGCTTGCCAAGAGGATGTCGCTTGAACGGCAGAGGTCCTTACCCAATCCCTACCAATATTGGCAGGGGCGTGATGCAGCTTCATTTGCTCCAAAATCGGATGTAGTACCAGATGCATCATTGCATTCAAAACTATTGTCTTCAGTGAGTGATAACTCTCGTCAACCTCAGTCCCAAAATCCGGAGTTAATGTCAATCATCCAAGGATTATCTGATAGGGCATCTGCAGGCTTAAATAATGGTGCTGTTGGATGGCCAAATTATCCCTTACAAGGTGCATTGGATCCCCTACAGAATAAAATTGACTTGCTTCATGATCAGAACTTTCCTCAAATGCCATTTGGAATTCAACAACAAAGGCTACCGACACAAAACCAATTGTCTTTAAGCAATTTACTGGCTCAAGCTGCTGATAACCCATCTAACACTTTGACAGCGGAGAAGCTACTTTCTTCAGGTTTATCACAAGATCCACAAATATTAAATATGCTGCAACAGCAATACTTGTTGCAACTGCATTCTCAAGCAGCTGCTCAAGCACAGCAGATGCCCTTGATTGATAAACTCATGTTATTGAAGCAGCAACAGAAGCAGGAGGAGCAGCAGCAGTTATTGCGACAACAGCAACAACTGCTTTCACAAGTGTTGCAAGACCAACAGTCTAGCCAGCTTTTTAACAATTCATCTTTTGGACAGTTGCAAGGTGTATTACCCATGGGGAATTTGCATGTGGATCCTTCTCAACTTCAACCACCACAAGAGATCTTTCCCATGAGCTCTCAGACACCAATTCCCAGTGTGCATAATGAGCATAGTTCTAATTCTTTGAATTTACCACTGAAAGTTAGTCAAGACACAAGTGGCAATGTAAGCAGTGAAGCTTCTATACGTCTGCCACACCAATTATTTGGAGATACTAGTGGTCCAGAAAATTGGGGCCCTAATCTTACTGAACAAATTAATGAAAAGTATCAGAATGAAACTTTCCCCATATCAACTCTTGTTGAGAGTTCTCCATTGCTTGATCAGAACAGACCCAAAGAGGAACCACACATTGTGCCGGAACCTCATTCTATTTCTGATTACACTGCTAAGTCAGTGGAGCAGGTGCCACCTAGCAATTTTATGCCTGATGGTGTTGTTGTGACCTCGATTTCTAAGCCTGATGAGAACTCTGGACAACTACAGTATGTTGCACCCACTGTTGCCTTATCTTCAGCTGGATCTAACAGGATCGAGTTGCCACCTGTGAGTGATCCTGGTATGGAGGTGAAGACCAAATTGGATATTGTGCATCAAGAGCAACATGCTGTAAGAGACAGCTCTGTATCTGAGCCCTCTCCGGGAGACATACGAAGCATTGAAGCTCATGAACCCAAAAAGGCTACCGAGAAGAAATCTAAGAAGCAAAAATCAGCCAAATCTCAGTCTTCTGATCAAACAAAGGGAGTGCTTAAAAATGTGACTTTGCAGCCATCAAAGCAGTCAGAAGCTGAAATACCAAAATTAAGTGAGTTGGGTGAAGCCAACAGGGCTGAATCATTACATGAAACAAATATGCAACAAACAAGAGTTAAGGGAACTCAGACTGGAAGTGCAGTCATAGAGGCAGTTGATCACCAACAAGCTGGTGGCTCGCCTGCTATTGTTACTGGAAATGTCACTGAAACAGTTGATGTGGCTGAGGCCAAGGCAGCTAGCTCTATTTTGACGCAGAAAACTGAAGTACCTGCAGGACGAGCTTGGAAACCCGCTCCTGGTGTCAAACCAAAATCTTTCTTAGAAATTCAACAGGAAGAACAGAGGAAGGCAGAGACAGAAATGCTTGTATCTGATATTGCTGTTTCTGTCAATTCAATGAGTTTGGTAAGTCCCTGGGTTGGGGTTGTGTCCAATCCAGACTCTGTGAAGGTTTCTAGTGAAAGTCACAAAGGAGTCAATACAGATTATCCAGTTAAATCTGAAACTTCTCAAAATCTTAAGAGCAAGAAAAGTCCTCTACATGATCTATTAGCAGAAGAAGTTTTAAAGAAATCTAATGAAATAGAAGCGGAGGTTCCAGATAGTATATTGCCCTCGGATAATATAGCTGTACATTCAGAATCACTGGATGATGGCAATTTTATTGAGGCAAAAGATACTAAAAGAAGCCGAAAAAAGTCAGCAAAATCAAAGGGTTCGGGAACTAAAGCTTCATTGCCTGTTGCATCTTCCGAGGCACCTATAGCTTCAAGCCCCATTGAAAAGGGGAAAAACTCCCGTTCGGCACAGCAGGAGAAAGAAGAATTGCCTGCCATCCCTGCTGGACCCTCTCTGGGAGATTTTGTGCTTTGGAAAGGAGAGCGAGAACCAGCAAACCCATCTCCTTCTCCAGCATGGTCTACTGATTCTGGTAGGGTTCCAAAACCAACTTCATTAAGGGACATTCTGAAGGAGCAGGAGAGAAAAGGCTCTTCTGCAATTCCTGTGAGCCCAATGCCTCCCCCTCAGAAATCTCAGCCTCCGCAGTCTACATGGACTAGTGCTTCGTCACGGTCAATTTCAGCATCCTCTCCATCTAAAGCTGCTTCTCCGATTCAGATAAATTCCCAAGCGTCTCAATCAAAATACAAAGGGGACGATGACTTGTTCTGGGGTCCAATGGAGCAATCTAAGCAAGATACTAAGCAGTCAGATTTCCCTCAGCTTGCGAGCCAGGGTAGCTGGGGTTCGAAAAATGTACCCTTGAAAGGTAATTCTCCCGGATTATTGACAAGACAAAAATCAGCGGGTGGCAAACCAACTGAACGGTCTCTAGCATCATCACCTGCCTCTTCTCAATCAGTGCTAAAATTGAAAAAAGATGCCATTACAAGGCATTCTGAGGCCACGGACTTCAGAGATTGGTGTGAGAATGAGTGCGTTAGGCTTATTGGGACAAAAGACACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCAGAAGCTGAGATGCTTCTTATAGAAAACCTGGGATCATATGATCCTGACCATGAATTCATTGATAAATTCCTCAATTACAAGGAGTTGTTACCATCAGATGTTTTGGACATAGCTTTTCAGAGTAGGAATGATAAGAAAGTTACTGGACATGGTGCGGCATCAGCTAATGCAGATATACAGGATGTGGACTACACTGAAGGATCCTCTAAAGGAGGTGGAAAGAAGAAAGGTAAAAAGGGGAAAAAGGTTAGCCCTTCAGTTTTGGGATTTAACGTTGTGAGTAACCGGATCATGATGGGTGAGATCCAGACTGTAGAAGATTAA	3621	0.4333	MPHLRAKARPPPGFSAPKPNDFTDVPGRQISGTFGNTLAGLNEVDILRSDSRHRQSSDTEAENRFLESLMSGNKNSPPLDSLTLSEGLQGFVGNNPGNMGPSGVDSGNNLYLLAKRMSLERQRSLPNPYQYWQGRDAASFAPKSDVVPDASLHSKLLSSVSDNSRQPQSQNPELMSIIQGLSDRASAGLNNGAVGWPNYPLQGALDPLQNKIDLLHDQNFPQMPFGIQQQRLPTQNQLSLSNLLAQAADNPSNTLTAEKLLSSGLSQDPQILNMLQQQYLLQLHSQAAAQAQQMPLIDKLMLLKQQQKQEEQQQLLRQQQQLLSQVLQDQQSSQLFNNSSFGQLQGVLPMGNLHVDPSQLQPPQEIFPMSSQTPIPSVHNEHSSNSLNLPLKVSQDTSGNVSSEASIRLPHQLFGDTSGPENWGPNLTEQINEKYQNETFPISTLVESSPLLDQNRPKEEPHIVPEPHSISDYTAKSVEQVPPSNFMPDGVVVTSISKPDENSGQLQYVAPTVALSSAGSNRIELPPVSDPGMEVKTKLDIVHQEQHAVRDSSVSEPSPGDIRSIEAHEPKKATEKKSKKQKSAKSQSSDQTKGVLKNVTLQPSKQSEAEIPKLSELGEANRAESLHETNMQQTRVKGTQTGSAVIEAVDHQQAGGSPAIVTGNVTETVDVAEAKAASSILTQKTEVPAGRAWKPAPGVKPKSFLEIQQEEQRKAETEMLVSDIAVSVNSMSLVSPWVGVVSNPDSVKVSSESHKGVNTDYPVKSETSQNLKSKKSPLHDLLAEEVLKKSNEIEAEVPDSILPSDNIAVHSESLDDGNFIEAKDTKRSRKKSAKSKGSGTKASLPVASSEAPIASSPIEKGKNSRSAQQEKEELPAIPAGPSLGDFVLWKGEREPANPSPSPAWSTDSGRVPKPTSLRDILKEQERKGSSAIPVSPMPPPQKSQPPQSTWTSASSRSISASSPSKAASPIQINSQASQSKYKGDDDLFWGPMEQSKQDTKQSDFPQLASQGSWGSKNVPLKGNSPGLLTRQKSAGGKPTERSLASSPASSQSVLKLKKDAITRHSEATDFRDWCENECVRLIGTKDTSFLEFCLKQSRSEAEMLLIENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQSRNDKKVTGHGAASANADIQDVDYTEGSSKGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQTVED	1206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	1	29	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	747	776	-	-
	Pumo9g00154	1206	Coils	Coil	301	325	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	814	1051	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	994	1051	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	946	981	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	587	609	-	-
	Pumo9g00154	1206	PANTHER	GYF DOMAIN-CONTAINING PROTEIN	1	1206	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	747	775	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	544	641	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	625	641	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	1162	1183	-	-
	Pumo9g00154	1206	MobiDBLite	consensus disorder prediction	562	586	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g00154	Pumo-Chr9	2100170	2104516	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo9g00154	9	2100170	2104516	Pumo9g00154	9	2100170	2104516	ECH