Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00123 ATGGATGCAACTATTGCAACAATGAATGCCAGTGCTAATCTTGTTACCAAGGGAATTGGATCAAGAAACAGAAGTTCTTCTGGGTTCTGGGGTGAGAACACAAGGGGAAGTTTTAACATCAGATTTTCTGGCGTTCAATCACGCAAGAGTTCAAAAGCTAGAAGTTTCAAGCCTGGTTTTGCATGCGCTGTTTACACACCAGACGTGAACAAAGAGTCACTGGTATTCCAGGGACCAATCTTTCAGAGTCCAAAAGCAAACCCAGAAAATGTAGCTGCTATCATATTGGGTGGAGGTGCTGGAACTCGACTCTTTCCTCTTACTAGCACAAGAGCTAAGCCAGCGGTTCCAATTGGAGGGTGTTATAGACTCATAGATATTCCTATGAGCAATTGCATCAACAGTGGCATCAGAAAAGTGTACGTTTTAACACAGTTCAACTCTTTCTCCCTCAATGGCCACTTGTCTCGCACTTATAATTTTGGAAATGGCGTGAACTTTGGAGGTGGTTTTGTGGAGGTCTTGGCTGCTACTCAAACTCCTGGAGAGGCTGGGAGCAAATGGTTCCAAGGGACAGCTGATGCAGTGAGACGATTTATTTGGGTTTTTGAGGATGCCAAGAACAAGAATCTTGAGCACATATTGATAATTTCTGGTGATCATCTTTGCCGGATGGACTATATGAAGCTTGTGGAGAAACATGTTGCGACAAATGCTGATATCACAGTTTCATGCGTACCAATGGATGAAAGCCGTGCATCAGACTATGGGCTAATGAAAATTGATAGAAAGGGACGGATTACGCAGTTTGTAGAAAATCCAGAAGAATCAGACGTGAATGCAATGCGGGCTGATACCACTCTCCTAGGATTAACTGCAGAAGAAGCACAGATACATCCTTACATAGCACCCATGGGTGTTTCGGTATTCAGAACTGAGACCCTGCTGAAACTGCTAAGATGGAGCTGTCCTTCTTGCAATGACCTTGGATCTGAAATTATCCCATCTGCTTTGAGGGACCACAAAGTCCAAGCATATATGTTCAGGGACTACTGGAAAGACATTGGAACTATCAAGTCCTTCTTTGAAGCCAATCTGGCACTAACTGAACAGTCTCCAAAATTTGAATTCTATGATCAAGAGACGCCTTTCTTCACTTCCCCAAGATTCCTACCACCCACTAAAGCAATAAAATGCAAGATTGTGGATGCAATTATTTCTCATGGTTGCTTCTTGAGTGAGTGTAGAGTTCAACGTTCTATTGTTGGTGTGCGCTCCCGTTTAGAGTCTGGTTCAGAGCTTCAGGATACCATGATGATGGGTGCTGACTACTATCAAACTGATTCTGAAATTGCAACTCTGCTGAAAGAAGGAAAGGTTCCAATTGGTGTTGGAGAGAATACCAAAATCAGGAACTGTATAATCGACAAGAATGCCAAGATAGGAAGAAATGTGATTATTGCCAATACTGATGGTGTTCAAGAAGCAGACAGGCCTACGGAAGGATTCTACATTAGGTCAGGCATCGTAGTTGTGGTGAAGAATGCAACAATTGAAGATGGAACAGTCATTTGA 1575 0.4292 MDATIATMNASANLVTKGIGSRNRSSSGFWGENTRGSFNIRFSGVQSRKSSKARSFKPGFACAVYTPDVNKESLVFQGPIFQSPKANPENVAAIILGGGAGTRLFPLTSTRAKPAVPIGGCYRLIDIPMSNCINSGIRKVYVLTQFNSFSLNGHLSRTYNFGNGVNFGGGFVEVLAATQTPGEAGSKWFQGTADAVRRFIWVFEDAKNKNLEHILIISGDHLCRMDYMKLVEKHVATNADITVSCVPMDESRASDYGLMKIDRKGRITQFVENPEESDVNAMRADTTLLGLTAEEAQIHPYIAPMGVSVFRTETLLKLLRWSCPSCNDLGSEIIPSALRDHKVQAYMFRDYWKDIGTIKSFFEANLALTEQSPKFEFYDQETPFFTSPRFLPPTKAIKCKIVDAIISHGCFLSECRVQRSIVGVRSRLESGSELQDTMMMGADYYQTDSEIATLLKEGKVPIGVGENTKIRNCIIDKNAKIGRNVIIANTDGVQEADRPTEGFYIRSGIVVVVKNATIEDGTVI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00123 524 Gene3D Hexapeptide repeat proteins 390 524 - -
Pumo9g00123 524 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 47 524 IPR011831 GO:0005978|GO:0008878
Pumo9g00123 524 SUPERFAMILY Trimeric LpxA-like enzymes 387 524 IPR011004 -
Pumo9g00123 524 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 188 196 IPR005836 GO:0005978|GO:0008878
Pumo9g00123 524 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 485 IPR029044 -
Pumo9g00123 524 CDD LbH_G1P_AT_C 392 518 - -
Pumo9g00123 524 FunFam Glucose-1-phosphate adenylyltransferase 390 524 - -
Pumo9g00123 524 NCBIfam glucose-1-phosphate adenylyltransferase 91 488 IPR011831 GO:0005978|GO:0008878
Pumo9g00123 524 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 97 116 IPR005836 GO:0005978|GO:0008878
Pumo9g00123 524 Pfam Nucleotidyl transferase 93 370 IPR005835 GO:0009058
Pumo9g00123 524 CDD ADP_Glucose_PP 93 355 - -
Pumo9g00123 524 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 80 389 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00123 Pumo-Chr9 1818075 1822086 Dispersed/Wgd