Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00113 ATGGGATCAGCTTGTTGTGTTGCTGCAAAGGATCCTAATCTTCCTAACAGAACTGGAGGTGAAAGTTTGCACAGAGATGTTGTGTGTTCACCATCGTGGAGCTTTCAATGGGATAGTCGTGGGCGTGTTGCTGGTGAAATTGAGAATCCATCCTATCACACATCTCATGTGGACAGTAGAAATGTTAGCATGGAGTTAAAAGGTTCATTAAGTTCCGAAAGAGGTAATTTATCAGACGGGGGAAGCATCCTGGAGAATTCTGTAACTCCTATTTCTCTGAAGTCCCCTGTTGATGAGGCATTGGTTGCAAATCTGATGACTCCATCTTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAATCCAGCAGAATCTTCAATACCAAATCTTTCTTTTTCAATACCGTCAGTCTTCTCAACCCCTACAGCAGATCCTTTGCCTAATCACAATTATCACCATCTTCCCAACTCTACCCCAACAAGATGGGCACATCGATCTCCAGCGCACCCTCTGTTGAGACAGATTTCTGATAGTCGAATCATGGGTCTGAAATCGCCAGACAACTCAATTTCTGAAGGAAGGCCATCATTTGTACTCTCTACTTGCAGCAATGAAATGGCAGCTGGATCCCTATGCGGATCATCTGATGGCTGGTCAATGCGCACCTTCTCTGAGCTGGTTGCATCATCTCAAAGGGAAAGGTGGTCTTTCGATAGTGAGTGTTTTGGCTCTGGTCGTCACAAGATAAGTGGATCCAGTAGCAGGTTCTCGTATTCTCCCTCCATGGAACTACAATCTTGTGGGGCTTGCTCAAAGCTATTGACTGAGAGATCTACATGGAGCAACCAGAAGTTTATTGCCAACAGCGACCTCTCAGTTGTTGCTGTACTGGTCTGTGGTCATTCATATCATGCAGAATGTTTAGAGGCTATGACACCAGAGGCAGATAGGTATGATCCAGCTTGTCCAATTTGTATGGTAGGAGATAAGCACTTGTCAAAGTTGTCCAGAAAAGGTCATCGGGCCGAATCAGACATAAAGGCCAAGAACCACAAGAAATCCAGAAGCCGCCGTGTAGTTGATGTTGGTTTTGATGTTTTTGATCGCCAAAAAGATATCGATTTGGGAGGAAAAGTTTCAAAAATGGAGCCTAGCTCCAGTGCAAGGAGCTCGTTTGGAAAGCCATTCTTGAGGCGGCACTTTTCACTTGGATCCAAGTGGAGCCGATCCCTGTCCGAGAATGATTCTGCTAGGAAGAAAAGTTTTTGGGCAAGATATCGTAAAGATTGA 1299 0.4473 MGSACCVAAKDPNLPNRTGGESLHRDVVCSPSWSFQWDSRGRVAGEIENPSYHTSHVDSRNVSMELKGSLSSERGNLSDGGSILENSVTPISLKSPVDEALVANLMTPSSDLSMSSNFSTVVKNPAESSIPNLSFSIPSVFSTPTADPLPNHNYHHLPNSTPTRWAHRSPAHPLLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNEMAAGSLCGSSDGWSMRTFSELVASSQRERWSFDSECFGSGRHKISGSSSRFSYSPSMELQSCGACSKLLTERSTWSNQKFIANSDLSVVAVLVCGHSYHAECLEAMTPEADRYDPACPICMVGDKHLSKLSRKGHRAESDIKAKNHKKSRSRRVVDVGFDVFDRQKDIDLGGKVSKMEPSSSARSSFGKPFLRRHFSLGSKWSRSLSENDSARKKSFWARYRKD 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00113 432 SMART ring_2 270 328 IPR001841 -
Pumo9g00113 432 PANTHER EXPRESSED PROTEIN 1 333 - -
Pumo9g00113 432 MobiDBLite consensus disorder prediction 411 432 - -
Pumo9g00113 432 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
Pumo9g00113 432 SUPERFAMILY RING/U-box 265 329 - -
Pumo9g00113 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 330 IPR013083 -
Pumo9g00113 432 MobiDBLite consensus disorder prediction 415 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00113 Pumo-Chr9 1673554 1676927 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00113 9 1673554 1676927 Pumo9g00113 9 1673554 1676927 ECH