Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00100 ATGGTGTCTCTAATCTCACCACCTTCTTCATCTTGCAACATTCAATTGCTGCGCGAAGCTCGCTTCTTCTCCACTCTCTTGCTTCCACCAAGAACCGTCCAATTCCACCACACACGCAACTCCGAAAATTACAAACGGAAAACGGTACGGTGCGGCGTTACGAGCGCGTCAACGTCGTTGGCAAAGGAGCCTCACAAGTACTTCGACCACGTAATCATCACCGTTCGCGCGGGTGACGGAGGCCACGGCGCGGTGCTGAATCAGCAGCAGGAGCAAGGAAAAACGAAGAAGAAAGGGAAGGGCTCGTTGAAGAGGGACTTCGATGGGTCCCTCATACTCCCCATGGGTGGCCACGGAGGGGATGTGGTGCTCTACGCGGACGAGGCCAAAGACACGTTGCTGGAGTTTCACAACAAGAGCCGCTACCACGCCAAGCGCGGTGGCAATGTTGATGCCATGGGCGTTTTGACTTCGATGCTGCGCGATGGACTTGCTGCACCGACGCTGCGCATTCCTGTTCCTGTAGGTACAGTTGTGAAAAGCAAACGAGGGAAGATGTTGGCTGATCTAGCACAACCTGGTGATGAAGTTCTTGTTGCGAGGGGAGGACAAGGAGGGATTAGCTTGTTAGAAATGCCACAGCATAAAAGGAAAAAGATGATGGCTCTGACAACTAATGTGATGAGAGATGACTCGGACAAGGTTTTAATTCACGGTCAACCTGGGGAGGAAGTTAAGTTGGAATTGATCCTACGAGTTGTTGCTGACGTTGGTCTGATTGGACTTCCAAATGCTGGGAAATCAACACTTCTGGCAGCCATTACACTTGCAAAACCCGATATTGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTTGGTGGTGATCCCAGCTTGGGGGCAGGAATGTATTCATCCGAAGCTACATTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGCAATTTTTTGAGGCACCTCAGGAGGACCCGGCTATTGGTCCATGTTGTTGATGCTGCCACTGAGAATCCTATAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTTGAACGACCATACGTTGTAATTTTGAATAAGATTGACCTACCAGAGGCAAAGGACAGACTTCCATCATTGACTCAAGAAATTATGAGAATTGGCAACGATGGTGCTGCTTCCGAACCAAAACCTAGCCCTGAAGTTCCAGATCAATTGTCTGATGAAACTGACAGGAAGGAAAAAAGACTTGAGGAATATCCACGACCTCTCTCTGTTGTCGGAGTTAGTGTTCTAAAGGGTATCAGGATTAACGAGATGCTAAAGGAGATAAGGTCGGCTTTAAGGAAGTGCTCAGATTCCAATGAAGCATTGGCTTTCAGTGTGCCACCTTGA 1443 0.4851 MVSLISPPSSSCNIQLLREARFFSTLLLPPRTVQFHHTRNSENYKRKTVRCGVTSASTSLAKEPHKYFDHVIITVRAGDGGHGAVLNQQQEQGKTKKKGKGSLKRDFDGSLILPMGGHGGDVVLYADEAKDTLLEFHNKSRYHAKRGGNVDAMGVLTSMLRDGLAAPTLRIPVPVGTVVKSKRGKMLADLAQPGDEVLVARGGQGGISLLEMPQHKRKKMMALTTNVMRDDSDKVLIHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMYNPEYLERPYVVILNKIDLPEAKDRLPSLTQEIMRIGNDGAASEPKPSPEVPDQLSDETDRKEKRLEEYPRPLSVVGVSVLKGIRINEMLKEIRSALRKCSDSNEALAFSVPP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00100 480 SUPERFAMILY Obg GTP-binding protein N-terminal domain 67 220 IPR036726 -
Pumo9g00100 480 ProSitePatterns GTP1/OBG family signature. 315 328 IPR006074 GO:0005525
Pumo9g00100 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 256 465 IPR027417 -
Pumo9g00100 480 CDD Obg 255 393 IPR031167 GO:0005525
Pumo9g00100 480 MobiDBLite consensus disorder prediction 405 435 - -
Pumo9g00100 480 MobiDBLite consensus disorder prediction 82 103 - -
Pumo9g00100 480 Gene3D GTP1/OBG domain 66 253 IPR036726 -
Pumo9g00100 480 Pfam 50S ribosome-binding GTPase 256 383 IPR006073 GO:0005525
Pumo9g00100 480 Gene3D - 254 473 IPR027417 -
Pumo9g00100 480 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 61 462 IPR045086 GO:0003924|GO:0005525
Pumo9g00100 480 ProSiteProfiles Obg domain profile. 65 254 IPR006169 -
Pumo9g00100 480 MobiDBLite consensus disorder prediction 418 435 - -
Pumo9g00100 480 PRINTS GTP1/OBG GTP-binding protein family signature 330 348 IPR006073 GO:0005525
Pumo9g00100 480 PRINTS GTP1/OBG GTP-binding protein family signature 257 277 IPR006073 GO:0005525
Pumo9g00100 480 PRINTS GTP1/OBG GTP-binding protein family signature 278 296 IPR006073 GO:0005525
Pumo9g00100 480 PRINTS GTP1/OBG GTP-binding protein family signature 313 328 IPR006073 GO:0005525
Pumo9g00100 480 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 255 465 IPR031167 GO:0005525
Pumo9g00100 480 Pfam GTP1/OBG 69 252 IPR006169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00100 Pumo-Chr9 1548066 1553024 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00100 9 1548066 1553024 Pumo9g00100 9 1548066 1553024 ECH