Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00099 ATGCTGAAATCAGGCATGGGAATTCAGGAGAGGAAGCAGGTGAAGAAACCATCACAAGCCAGTTCCAGAAAGGGGTGTATGAGAGGCAAAGGAGGTCCTGAGAATGCCAGTTGCACCTACAAAGGTGTGAGGCAAAGGACCTGGGGAAAGTGGGTTGCTGAAATCCGTGAACCCAACCGTGGTGCACGGCTCTGGCTTGGGACCTTTGAAACCTCTCATGAGGCTGCCTTGGCCTATGATGCTGCAGCAAGAAAGCTCTATGGACCTGATGCAAAACTCAACCTGCCAGAACTCGCTGTGCCTGCTGTGAATTCTCAGTATCCACCACCAAATCCTTCTCCCAACACTCAGATGAGTCAGATCCCCCAAATGCAACAACAGCCTCAGGTTCACCAAACCTTTGACGTTCTCAACGTCACTTCTTCTGATTTCAACATGGAAAACCCTTTTGTCTCCATGGTTTCTCAGCAGGTTGTTGAATCAGCACCACCAGTGTACACCAGCAGCGACTCTATTGTCTCTCTTCCATCTGAGATCAACACCACCGTGCCAATGGAAAATTATTCCTCCTCCGTTCCTGTGGAGAACAACAACAACAACAATGACGTTCGTTCCTTCTGGGGGCCGTCAATGAATGATACCATGCCTATGTTTGATGAATCCATTTGGACTGAAGCGGCTATGTCCCTTGATTTTCCTCCTATGATTGCAGATGATGGATTTTACGGAGCTGGAAACAACTTCCCTGATGAAGTTGGTGCTTGGGACTCCCTGCAAACTCCTTGGTGCATGTAA 795 0.4868 MLKSGMGIQERKQVKKPSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGPDAKLNLPELAVPAVNSQYPPPNPSPNTQMSQIPQMQQQPQVHQTFDVLNVTSSDFNMENPFVSMVSQQVVESAPPVYTSSDSIVSLPSEINTTVPMENYSSSVPVENNNNNNDVRSFWGPSMNDTMPMFDESIWTEAAMSLDFPPMIADDGFYGAGNNFPDEVGAWDSLQTPWCM 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00099 264 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Pumo9g00099 264 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Pumo9g00099 264 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Pumo9g00099 264 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 12 221 - -
Pumo9g00099 264 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Pumo9g00099 264 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Pumo9g00099 264 MobiDBLite consensus disorder prediction 1 38 - -
Pumo9g00099 264 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Pumo9g00099 264 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Pumo9g00099 264 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Pumo9g00099 264 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00099 Pumo-Chr9 1545753 1546547 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pumo9g00099 AP2 6.2e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00099 9 1545753 1546547 Pumo9g00099 9 1545753 1546547 ECH