Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00095 ATGGCTGGGTTCTTCTCTCTAGGAGGAGGAAGGCAGAACAAGGCAGAAGAAGAAGAGGATCAAAGAGAAGACAACGTTAACGCCGGTGGTAACAGTCAATTTTTGTTCAGGAACGTTAACGAGGAGATCTACAACAAGGGGTTCGAGATATGGCCACAATCCTCGTACCACCACCAGAACTTGAGCAACTTCTACTCCTTCGGTGTGGGGCCTAGTCGCAGAAACAACAATAATAGCTCTCCCAACAACGTAAACGACGACGTTTCTGTCTCTTTCTCGGATGAGTCGAACCGGTTCGGCTTCACGGTGATGAGGTCCGGTGGCGGCGTAGGTGGCGGCGGCGGCATGAACTGTCAGGACTGTGGGAACCAAGCGAAGAAGGATTGTCAACACCTCAGATGCAGAACTTGCTGCAAGAGTCGAGGGTTTCAGTGCCAAACGCACGTTAAGAGCACTTGGGTTCCCGCGGCTAAACGCCGTGAACGACAGCAACAACTTTCTGCGTTGCAGCAACAAAATCAACAGCCTCAGTTTTGTGGAGATCACTCAAAACGACACAGAGAAATCATCGAAGGTGCTGGTGCTGGTGCTGCTGGTGGTTCTCTAGCTTGCGTTCCGGTTCCTATAACCACCACAGGGTTGGAGCTGGGGCAATTTCCACCTGAGCTAAACTCTCCAGCGGTGTTTCGGTGTGTGAAAGTGAGTGCAATGGATGCACCGGACGAGCGTTACGCGTATCAAACCGCAGTTAACATAGGAGGACACGTGTTCAAGGGAATTCTCTACGACCAAGGAACGGAGGGTCCTTACGCGGGTGCAGGTTGTGAGGGTTCCTCCGGTGGCGGCGGCGAAGCTCAGCCACTAAGTCTCATCGCCGCCACAACCACCGCCACAACAAGCGGAAACCCTTTTGACGCTTCACTCTACACGGCTCCGATGAATCCTTTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGATCCTAA 987 0.5279 MAGFFSLGGGRQNKAEEEEDQREDNVNAGGNSQFLFRNVNEEIYNKGFEIWPQSSYHHQNLSNFYSFGVGPSRRNNNNSSPNNVNDDVSVSFSDESNRFGFTVMRSGGGVGGGGGMNCQDCGNQAKKDCQHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLSALQQQNQQPQFCGDHSKRHREIIEGAGAGAAGGSLACVPVPITTTGLELGQFPPELNSPAVFRCVKVSAMDAPDERYAYQTAVNIGGHVFKGILYDQGTEGPYAGAGCEGSSGGGGEAQPLSLIAATTTATTSGNPFDASLYTAPMNPFMAGTQFFPPPRS 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00095 328 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 301 IPR007818 GO:0003700|GO:0006355
Pumo9g00095 328 NCBIfam putative zinc finger domain, LRP1 type 117 159 IPR006510 -
Pumo9g00095 328 MobiDBLite consensus disorder prediction 1 31 - -
Pumo9g00095 328 Pfam Domain of unknown function (DUF702) 115 267 - -
Pumo9g00095 328 NCBIfam LRP1 C-terminal domain 218 265 IPR006511 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo9g00095 Pumo-Chr9 1453885 1456064 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pumo9g00095 DUF702 4.3e-64 No_clan