Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00090 ATGGAGGGAGAGGATATTAGGTCTGGGACCAAGAAGAAGCGATCCAAGAAGGAAATTGGTTTTGACTCTGACGACGACGAGCCCATTGGGTCAATCTTTAAGCTAAAGAGGTCCAAGAAGAAGGGTAGTGGTAGTGATGCTGCTGTTAGGGAGAAAGAGGATTTGGGGGGTATGGATGATAATGATACCCTGGCTAGCTTTAGGAAGAGGTTGAAGGGTCCTAAGAGAGATCAGGGATCTGGGGTTACAAGAGGAGCAAGTCCTGCTTTGCATGTGTCTGATGAAGATGTGGTTGCTTTGGGACCTAAGGGTAAGGATGAGAAAGGGGTGGTGCCTGGTGATGAGGACATGCAGATGCAGATGCAGATGCAAGATTGTTCTGATCAACACATGGAGGATTTGTTGTCCGCGATTTTCCATAAGGCACCGTCTAGTTCTACTAGGAAATCTCGCGGGGGTTCGAGGCAGAAAAGGGGGATTCCGAATGTGGATAGTGAAGGTTTTGTGGAAGCTGTGGATTCTGTGGTTGAAAGTAGATCTGGATCTGCTTCTGGCTTGAAATTGGTTGGGGGAAATGTCGTGTCTGCAGATGCTTTGCCTCAAGCATCTGAACCGGTTGTTGCATCTGTGGTGGATGATCAGAAGTGTGGTGATGACTGTTTTCAAGAGGAAACTGTGAAGCACGGTTGTGATTTGGAAATTCCAGATGGACCGTCTCAGTCGAACAATGTCTGCCATGGAGATAGGCAGCAATTGTCTTGTGTACAAGTTGAAGATATTTCTTGTCATTCTGACCAAAAGGTTGCATTGCAGGAAAGTGTTCTCAGTGATGGTTTAAATAAGTTATCTACCACGTCACACGATGAAATAGTTGATACCGTCTCTCTCTCAAAAGTGGGGGAAGGCGAAAGAGGATTTACTGAGGTAGGAGAGTCCGAGAACAGATTGACAGATGAACTAGCACAAGTGTGCAACAGTGCTTCAGAACCCGATGTTTCTACTTCTGCTGGGAAAGAAAATGTCTTAACTTCTTGCCACACTGAACCCTTGATTAAATCAACTGAAAATATATTGAATGAGAATAATAATATGGTTGCTGGAAAAGTTTTCCAGGAATCCTCAAGTAATGGAGCTCTAAAGTTATCTGGATGCCATATGGAAGTAGATGGAGGTGGAAAATCAGAAACTGAGTTCGTTTCTGATAGAAATTTCTGTGATTATAGTAGTTTTGGTACAAAGGCTGAAGTGCAAGATTTTGTTTTAGGTTTTTCACCTAAAAGAAATAATGTAACTGTCAGTGGTAGTTTATCTTCTATGGTGTCTAATGAAGCCAATGAAGCTGAATTGACTGCCCACTCAAATCACCCTGAGAAACCTCTAGAAGCTTGCAATATTCCAAAAGACTCTACTGCTTCAATTCTGAAATGTAGCTCAGTGTTAGATCCAATTCAATCTGATGAATCCTCTCTTCAGTCTTCTATTCCAGATGAAAATGGGAACTCTGCAGAATACCGTGTCCCTGCGTCTGATTTTACTGGTAATGAGGGTAAGATATCAAGCATTCCACGGGCAGTGCGAAAGGCCAAAATGCGTAAGCATGGAGACATGACATATGAGGGGGATGCTGATTGGGAGATTTTAATTAACGATCAAGCTCTAAATGAAAGTCAAGTTATGACAGATGGTGACCGCACTCTTAGAACAAGAATGAAGCATGATTCCTCTTTGAATACTGGTGAAGACTCTGAAAATGTTGCAGTAGTAGCAGTATCAGCTGGGCTGAAAGCCCGTAAAGCTGGTCCAATTGAGAAAATAAAGTTTAAGGAGATCTTGAAGCGCAAAGGTGGTCTCAAGGAATATTTGGATTGCAGAAATCAGATTTTAAGTCTTTGGAGCAGAGATGTCACGCGTATTTTGCCTCTTGCTGAATGTGGAGTTAGTGATACTCATTCTGAGGATGGAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTCGATCAATATGGTTATATAAATGTTGGAATTGCCTCTCAGAAGGAGAATGTTGGAAGTAGTGGAAGGCATTGTTATAAACTGGTAAAAGAAAAAGGTTTTGAGGAAAGTCTCGCAGCTTCAATGGCCGACTCTGAAGACGGAGTTTCCTTTCTTGTTGGTCAGACCAAAATGTCAGATACTTCCAATGAGATTAACAATGACCTAACAAAGGATTGTGATGACCTAACAACTGAACCTGCAGAAGGCATGAGGCATGCTAATGAAGTGAAGATGGATTTATCAAACATGACACAACAGGCAGAAGGAAAAAAATTTGATTACCAGGAAAATGATGGGTTTCAGGATGGAACTATACATGTCACTATTGACAGTTCCGTTCCTTCTTCCAACTTTCCTGATTGCAGATTGACTTCTCTGGTAGCTAAAGAGAAAAGCAACGACTCTACCTGCATAAAATCTGCCTTAGGTGGTCAGGTAGGTGATCATCTGCAGTCTGATTTAGATCCTAGGAAGAGAGTAATTATCATTGGAGCTGGTCCTGCCGGGCTAACCGCTGCTCGCCACTTGCAACGTCAGGGATTTCCTGTAACTGTGCTTGAGGCTAGGAGTAGGATAGGAGGCCGTGTATTTACTGATCACTCATCACTTTCTGTCCCTGTTGATCTCGGTGCTAGCATTATAACTGGTGTTGAGGCTGATGTGGCCACTGAGAGGAGACCAGATCCTTCCTCATTGATTTGTGCTCAGTTGGGCCTTGAGTTGACAGTGTTGAACAGTGATTGCCCTCTTTATGACATAGTGACAGGACAAAAAGTTCCTGCAGATATGGATGAAGCACTGGAAGCTGAGTATAATAGTCTTATTGATGATATGGTATTGGTTGTTGCTCAGAAAGGTGAGCAAGCAATGAGAATGTCTCTTGAAGATGGTCTAGAATATGCTCTTAAGATTCGCCGTATGGCACGCTCTGAAAGTAGTGAAGAAGCTGAACAAAATAATTCTGCAGATAGTCCGTTTGATTCCAAAAAGGACAGTACTGTGGGAAAAAAACTTGATGAGGAGATTTTGAGTCCTCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTTGCTTAAGGATGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGTTTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCTCTGTTGTTGAGTCTCTGGGAGAAGGACTTACAATTCACTTGAACCATGTCGTAACAAATGTGTCATATGGTATCAAGGAACCTGGCCAGAGTAATAAAGTCAAAGTTTCTACGTCAAATGGCAATGAGTTCTTTGGCGATGCTGTCCTTGTGACTGTTCCGCTTGGCTGTTTGAAGGCTGAAGCTATACAATTCTCCCCACCTTTGCCACAGTGGAAATTTTCTTCTGTTCAGCGTCTTGGTTATGGAGTTCTAAATAAAGTGGTTTTGGAATTTCCTAGTGTATTTTGGGATGATGCTGTGGACTACTTTGGAGCAACAGCTGAGGAGAGAAGCAGTAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAAAGCTTGAGCTCTTCTGATCATGTTAACCATGCATTGAAGGTTCTCCGTAAACTTTTTGGGGAGGACTCAGTTCCTGATCCTGTTGCCTATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTTCTTATTCTTACGTTGCTGTTGGAGCATCTGGAGAAGACTATGATATATTAGGGAGACCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCAGACACTGTTGGTGGTGCAATGATGAGTGGACTACGAGAGGCTGTTCGCATAATTGACATATTGAGCACTGGAAATGATTATATTGCAGAGGTGGAGGCATTGGAAGCTGCTCGGGGACAGTTAGACACTGAAAGGGATGAAGTTAGGGATATAATAAAGAGACTTGATGCATTAGAGCTTTCTAACATAATGTACAAGAACTCTTTAGATGGTGCTCAAATTTTAACCCGGGAAGCTTTGTTAAGGGAAATGTTCTTTAATACGAAAACCACTGCTGGGCGCTTGCATGTGGCCAAACAATTGCTAACTCTTCCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGGCTAGCCATTCTCAATTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCTTGAGGCACTGTTTGCGCCTTCTTGTCCGTGTTTCGACTGATCTTCTTGCTGTACGATTATCAGGAATGGGGAAAACCGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGCAAGGAAAAAGCTTCTAATGGTGGATTGAAGATATCAAGACAAACAACTGCTGTAGATTTATCAAAGAGAAAATCTGTAAAAGATTCAGCCTCGGGAAAGCCACCTCTGAGCACATATCATGGTACCATTGAGAATAAAGGAGGCCTGCTGAATCCTACCTCTGCTGGAAGCAATTCACCTTCCACTGCACATGTGAAGAAATTGCACAGCAAACAAGGAAGACAACCAGTAGCATATGACTCAAGGCATGAGGTCAGTTCTTCCAGGTCTAAAGGTTCAATAGACACAGTAGTTACTGAGAAGGAGGATAACCTCTACGCTATATCTGAAGAGGAACAGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTGCTAAAGCTCTTGCTGCTGCCGAGGCATATGCCTCTGCAGAAGCCAGATGTAATACGCTGTTACAGCTTCCAAAGATACCCTCATTCCACAAATTTGCTAGACGTGAGCAGTCTTCACAAAATGACGAGTGTGATAGTAGAAAAAGATGGTCTGGTGGTGTTTTTGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGGAATTGCAGGGTTAGGGACTGGTCTGTTGATTTCTCCGCTGCTTGTGTCAACCTTGATAATTCCAGAATGCCAGTTGATAACCTCTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGGGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGCTGGTGGTGTTGCAATTAAAGACTATCATGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCCGATTCTTATTTTTCTAACCCAACTATTCATTTGAAGGATGAGGAGGATTCAAATGCCTGTTCAAAGTTACCCAGCTGGAAGCGTGATGGTATTGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGAGGCCCAAAAAAGTCATTCCCGAGGAGCAGATCATATTAAACTGGCTGTTGTGGACTATGTTGCATCACTACTTATGCCCCTGTACAAGGCAAGGAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGTTTCAGGTTATGGAGCAAGCCACAGATGCCGAAAAAGCCATGACTGTTCGTGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGCTCCTTTGTGGATGTATTGATTGAGAGACACATGACAACGAAACCAGACAAAAAATCTTAA 5736 0.4294 MEGEDIRSGTKKKRSKKEIGFDSDDDEPIGSIFKLKRSKKKGSGSDAAVREKEDLGGMDDNDTLASFRKRLKGPKRDQGSGVTRGASPALHVSDEDVVALGPKGKDEKGVVPGDEDMQMQMQMQDCSDQHMEDLLSAIFHKAPSSSTRKSRGGSRQKRGIPNVDSEGFVEAVDSVVESRSGSASGLKLVGGNVVSADALPQASEPVVASVVDDQKCGDDCFQEETVKHGCDLEIPDGPSQSNNVCHGDRQQLSCVQVEDISCHSDQKVALQESVLSDGLNKLSTTSHDEIVDTVSLSKVGEGERGFTEVGESENRLTDELAQVCNSASEPDVSTSAGKENVLTSCHTEPLIKSTENILNENNNMVAGKVFQESSSNGALKLSGCHMEVDGGGKSETEFVSDRNFCDYSSFGTKAEVQDFVLGFSPKRNNVTVSGSLSSMVSNEANEAELTAHSNHPEKPLEACNIPKDSTASILKCSSVLDPIQSDESSLQSSIPDENGNSAEYRVPASDFTGNEGKISSIPRAVRKAKMRKHGDMTYEGDADWEILINDQALNESQVMTDGDRTLRTRMKHDSSLNTGEDSENVAVVAVSAGLKARKAGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSRDVTRILPLAECGVSDTHSEDGSPRSSLIREVYAFLDQYGYINVGIASQKENVGSSGRHCYKLVKEKGFEESLAASMADSEDGVSFLVGQTKMSDTSNEINNDLTKDCDDLTTEPAEGMRHANEVKMDLSNMTQQAEGKKFDYQENDGFQDGTIHVTIDSSVPSSNFPDCRLTSLVAKEKSNDSTCIKSALGGQVGDHLQSDLDPRKRVIIIGAGPAGLTAARHLQRQGFPVTVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTGQKVPADMDEALEAEYNSLIDDMVLVVAQKGEQAMRMSLEDGLEYALKIRRMARSESSEEAEQNNSADSPFDSKKDSTVGKKLDEEILSPQERRVMDWHFAHLEYGCAALLKDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGLTIHLNHVVTNVSYGIKEPGQSNKVKVSTSNGNEFFGDAVLVTVPLGCLKAEAIQFSPPLPQWKFSSVQRLGYGVLNKVVLEFPSVFWDDAVDYFGATAEERSSRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSSDHVNHALKVLRKLFGEDSVPDPVAYVVTDWGRDPFSYGSYSYVAVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSTGNDYIAEVEALEAARGQLDTERDEVRDIIKRLDALELSNIMYKNSLDGAQILTREALLREMFFNTKTTAGRLHVAKQLLTLPVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKISRQTTAVDLSKRKSVKDSASGKPPLSTYHGTIENKGGLLNPTSAGSNSPSTAHVKKLHSKQGRQPVAYDSRHEVSSSRSKGSIDTVVTEKEDNLYAISEEEQAAIAAAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARREQSSQNDECDSRKRWSGGVFGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFREHSGESVAGDSSIYTKAWIDTAGGVAIKDYHAIERWQSQAAAADSYFSNPTIHLKDEEDSNACSKLPSWKRDGIANESSISQVTVNKEAQKSHSRGADHIKLAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKFQVMEQATDAEKAMTVREFLDFKRKNKIRSFVDVLIERHMTTKPDKKS 1911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00090 1911 Coils Coil 1335 1362 - -
Pumo9g00090 1911 MobiDBLite consensus disorder prediction 1 111 - -
Pumo9g00090 1911 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1417 1500 IPR035441 -
Pumo9g00090 1911 MobiDBLite consensus disorder prediction 1513 1586 - -
Pumo9g00090 1911 SUPERFAMILY FAD-linked reductases, C-terminal domain 1157 1268 - -
Pumo9g00090 1911 PANTHER FLAVIN MONOAMINE OXIDASE 839 1326 - -
Pumo9g00090 1911 Gene3D - 841 1317 IPR036188 -
Pumo9g00090 1911 Gene3D - 584 688 IPR036388 -
Pumo9g00090 1911 Pfam SWIRM domain 598 675 IPR007526 GO:0005515
Pumo9g00090 1911 MobiDBLite consensus disorder prediction 991 1021 - -
Pumo9g00090 1911 Pfam Flavin containing amine oxidoreductase 849 1319 IPR002937 GO:0016491
Pumo9g00090 1911 SUPERFAMILY FAD/NAD(P)-binding domain 837 1321 IPR036188 -
Pumo9g00090 1911 MobiDBLite consensus disorder prediction 140 161 - -
Pumo9g00090 1911 MobiDBLite consensus disorder prediction 1 77 - -
Pumo9g00090 1911 SUPERFAMILY Homeodomain-like 583 680 IPR009057 -
Pumo9g00090 1911 FunFam Lysine-specific histone demethylase 1A 584 688 - -
Pumo9g00090 1911 Gene3D - 947 1274 - -
Pumo9g00090 1911 ProSiteProfiles SWIRM domain profile. 585 685 IPR007526 GO:0005515
Pumo9g00090 1911 PRINTS Adrenodoxin reductase family signature 840 862 - -
Pumo9g00090 1911 PRINTS Adrenodoxin reductase family signature 863 876 - -
Pumo9g00090 1911 MobiDBLite consensus disorder prediction 1540 1559 - -
Pumo9g00090 1911 MobiDBLite consensus disorder prediction 995 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00090 Pumo-Chr9 1383531 1395692 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Pumo9g00090 Amino_oxidase 1.2e-108 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00090 9 1383531 1395692 Pumo9g00090 9 1383531 1395692 ECH