Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00087 ATGGAAGGTGTTGATCAGAGTAATATGAATCGAAATAGTTGTGTATTTGGTTCATCACCAGGAGCTGCTTCTCTTAGACCCCCAAATCGATTGAATAATGTTATGCCTATTAATCAAATGGGTGTTGCTGAGAACCAGAAACCCTATGGTATACCACCCTCACACCCTAATACCAATATTTCACCTTCATCACCTTATTCTCAATTTTTTGCTTCCCAATCCCAATCCAATTCGGTTTCTCAGCGTTTGTGTTCTCCCAATTTGAGTCCTGCTTCATCCCATTCCAGGTCTTTGTCTCAGCCCTCTTTTTTCTCTCTGGATTCCTTGCCCCCATTGAGTCCTTCACCTTATAGAGAACCCTCCTTTTCTGACTCAATTTCAACTGATGTGTCTGCTGAGGAAAGCTTGGCTACCTCTCATGCCCCTTTGCCTAACCGTGGTCACGCGCTTCAGCTTGGCCATTCTCTTCCCCCGCGTAAAGGACATAGGCGCTCTAGCAGTGATTCTCCTTTGGGAATCTCTGATTTTATTCAGTCTGTGCCTCAGTTGGTTCCCTCCAGGACTTGGAGTGACCGTGACAATTCGGCTTCTAGGGGAGGGAGCTCTGGTTTTGAAAAGCCGATTCAGTTGGTGTTAAAGGAACCAATTAAGGATATGGACTGTGTTGATGGTTTTGGTGGAGAACCTATGGTTGGGAGGAAAGAGGATGATGCACTGGATGATTTGTTTAGTGCATATATGAATTTGGACAATATTGACGGTCTGAATTTTTCTGGGATGGAAGATAAGGATTTGGATAGCAGAACTAGTGGTTCCAAGACAGTTGACAGCAGTGATAATGAAGTTGAGAGTCATGCACATGGAAAAGCAACCAGTGCTCAAGGGGCTAGTTCAAGCTGTTCTGAAGAGAGGAGGGAAGGAGTGAAGAGGAGTTCTAATGGAGACATTGCACCCGGCTCCCGACACCGGAGAAGTTTCTCATTGGACAGCTCTATAGGAAATTTTCATATTGGAGATGAATCGCCTAAGCTTCCTCCTTTGCAAAACCGAGTTGGTCAACACTCACCTAGCAGTTCAATAGATGGTAAGACATCTGAAGCAAGCATCGAGTTTGGAAATGGTGAATTCAGCTCAGAGGAGCTAAAGAAAATAAAGGAAAATGATAAACTTGCTGAAATTGCCATGGCTGATCCTAAGCGTGCAAAAAGGATTTTGGCTAATCGTCTATCAGCTGCTCGCTCAAAAGAGCGGAAGATGCGGTACATTTCTGAATTAGAGCTCAAAGTCCAAACACTTCAGACAGAGACAACCACATTGTCTACTCAGTTTACCAAATTACAGATGGATAATTCAGAACTTAAAAGTGAGAATAATGAGTACAAATTGAGGATTCAAGCCTTGGAACAGCAGTCCCAACTGAAAGATGCTCTGAATGAGACCTTGGATGCTGAAGTGCGGCGTTTAAGACGCACAGTTGCAGAACTTGGTGGAGAGTCCCTCCTCTCAAGTCGCATGGCTCAACAGCTTGCTATTAGCCAACAAATGTTCCAGTTACAGCACCAGCAGCACCCTAACCAGCTTAGACATGTTCAACTGCACAATAGCCATTCCCAGGAGCAGACACAGACTCAGTCACAGCACCACAATGGCAAAGCTACTGCCTACTGA 1668 0.4466 MEGVDQSNMNRNSCVFGSSPGAASLRPPNRLNNVMPINQMGVAENQKPYGIPPSHPNTNISPSSPYSQFFASQSQSNSVSQRLCSPNLSPASSHSRSLSQPSFFSLDSLPPLSPSPYREPSFSDSISTDVSAEESLATSHAPLPNRGHALQLGHSLPPRKGHRRSSSDSPLGISDFIQSVPQLVPSRTWSDRDNSASRGGSSGFEKPIQLVLKEPIKDMDCVDGFGGEPMVGRKEDDALDDLFSAYMNLDNIDGLNFSGMEDKDLDSRTSGSKTVDSSDNEVESHAHGKATSAQGASSSCSEERREGVKRSSNGDIAPGSRHRRSFSLDSSIGNFHIGDESPKLPPLQNRVGQHSPSSSIDGKTSEASIEFGNGEFSSEELKKIKENDKLAEIAMADPKRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSENNEYKLRIQALEQQSQLKDALNETLDAEVRRLRRTVAELGGESLLSSRMAQQLAISQQMFQLQHQQHPNQLRHVQLHNSHSQEQTQTQSQHHNGKATAY 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00087 555 MobiDBLite consensus disorder prediction 1 101 - -
Pumo9g00087 555 MobiDBLite consensus disorder prediction 263 366 - -
Pumo9g00087 555 SUPERFAMILY Leucine zipper domain 399 454 IPR046347 GO:0003700|GO:0006355
Pumo9g00087 555 Coils Coil 415 435 - -
Pumo9g00087 555 Pfam bZIP transcription factor 399 457 IPR004827 GO:0003700|GO:0006355
Pumo9g00087 555 Coils Coil 443 498 - -
Pumo9g00087 555 MobiDBLite consensus disorder prediction 118 135 - -
Pumo9g00087 555 MobiDBLite consensus disorder prediction 167 202 - -
Pumo9g00087 555 FunFam Transcription factor VIP1 isoform A 397 459 - -
Pumo9g00087 555 CDD bZIP_plant_RF2 400 472 IPR044759 GO:0003700|GO:0006355
Pumo9g00087 555 Gene3D - 398 463 - -
Pumo9g00087 555 MobiDBLite consensus disorder prediction 1 19 - -
Pumo9g00087 555 MobiDBLite consensus disorder prediction 115 207 - -
Pumo9g00087 555 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 88 548 - -
Pumo9g00087 555 MobiDBLite consensus disorder prediction 348 366 - -
Pumo9g00087 555 MobiDBLite consensus disorder prediction 51 101 - -
Pumo9g00087 555 SMART brlzneu 395 459 IPR004827 GO:0003700|GO:0006355
Pumo9g00087 555 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 397 460 IPR004827 GO:0003700|GO:0006355
Pumo9g00087 555 MobiDBLite consensus disorder prediction 532 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00087 Pumo-Chr9 1339635 1343452 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo9g00087 bZIP_1 1.9e-10 CL0018