Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00072 ATGGCTCTCCTAACTTCCTTGCCTGAACAGTCCAGTACCCCCAAACGCCACAAGCGTAAGCCACAACAACAACAGAAACAAAAGCAAAAGCAAAAACAGAAACCACCCTCTTCATGGGACCAAATCAAGAACCTCTTAACCTGCAAACAGATCGAAGGGTCGAGAGTGCATGACCCTTCAAAGGTAACTGGGTACTCCAAGTTAGGTTCTTCTTGCAGCTCCATATGCAGCTTCAGAGATGTGGTTCATGGGAACACACGTGTTGTGCACAGGTCTGATAACTCCTCACCAGAGAGTAGTTCTCTGGGTCAGGAAACTGGGTTACTCACTAGAAAACCTGTTACTACCACTCGCTCCGCAACATCAGGTTCGGGAAAATCAAACGGTGGAGCAACCTACACGTCATCATCATCTTCCAGAGGCATGCAATTCAGGAAGCTATCTGGGTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCAATTGCGAGGAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAAAGTTTGGAGCTTCATCAAGCGGTTCGTCATGCCGTTTCGGAGCTAGGTCCGGAGGATTCGGGTCGGAACATAGTGGAAATAATCTTCAAATCGAGCTGGTTGAAGAAGGACAACCCGATGTGCAAGATCGAACGGATACTAAAAGTGCACAACACCCCACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACGGTAAAGAACCGTGCGCTGAGCAGCACCAAGAAAAACCCCAGGTGCGCAGCCGACGGCAACGAACTCTTGCGCTTCCACTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGGTCTTCCTCCCTCTGCGCCTCCGTACCCGGCTGTGGTGTCTGCACCATCATCAGGCACGGTTTCCAAGGTGGAAGCGGCGGCGGTGGTGACCACGCGAAGGTCAAGGGCGTGAGAACCACCGCCAGCAGCGGTAGGGCCCACGACTCTGTGGTGGGCGGTGACGCCACGCGCAGGGCCATACTGGTGTGCCGCGTGATCGCGGGGAGAGTGAAGCGCGTGGCGGAGGACGCGCCGTCGGAGGAGGAACACGTGTCGGTTGCGTCGTATGATTCCGTAGCTGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGCTTGTTTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTGGTCATTTATAAAGTCCTTTCGTGTTAG 1239 0.5335 MALLTSLPEQSSTPKRHKRKPQQQQKQKQKQKQKPPSSWDQIKNLLTCKQIEGSRVHDPSKVTGYSKLGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLTRKPVTTTRSATSGSGKSNGGATYTSSSSSRGMQFRKLSGCYECHMIIDPSRLPIARSTVCACSHCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPMCKIERILKVHNTPRTIQRFEECRDTVKNRALSSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGGSGGGGDHAKVKGVRTTASSGRAHDSVVGGDATRRAILVCRVIAGRVKRVAEDAPSEEEHVSVASYDSVAGYAGIYSNLEELLVFNPKAILPCFVVIYKVLSC 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00072 412 ProSitePatterns Zinc finger C2H2 type domain signature. 170 193 IPR013087 -
Pumo9g00072 412 FunFam C2H2-like zinc finger protein 194 408 - -
Pumo9g00072 412 ProSiteProfiles Zinc finger C2H2 type domain profile. 170 198 IPR013087 -
Pumo9g00072 412 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 37 407 - -
Pumo9g00072 412 MobiDBLite consensus disorder prediction 89 138 - -
Pumo9g00072 412 MobiDBLite consensus disorder prediction 1 41 - -
Pumo9g00072 412 Gene3D - 194 409 - -
Pumo9g00072 412 SUPERFAMILY ADP-ribosylation 195 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00072 Pumo-Chr9 1087578 1090880 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pumo9g00072 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00072 9 1087578 1090880 Pumo9g00072 9 1087578 1090880 ECH