Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00040 ATGGAAGTGGACAGTGCAACATCTGCTATTCAAACCCTGGCGGCAAAGCACTTATTGCCTGAGCTAGAAATCTACTGTTACCTCCTTGTCCTACTTTTTCTGATTGACCAGAAAAGATACCATGTGGTTGAGTCCTGTTCATGCCAAAGCTTGTTCCTCAGCCTGAATAGAAGAACTGTCGATGTTATTGCTTCAAGACTCTACTTTTATTACTCATATAGCTACGAGCTTACAGGAGATCTTGCTGAAATTCGAGGCAACCTCCTTGTATTGCACCGAATTGCTACCCTGCGCCATGATGAGCTGGGTCAGGCTGTCCGGATTGGTGACTTGGAGCTATTTAGGAATGTTGCAGAGAAGTTTGGTACAACTTTCAATAGAGACCGAACTCATAATTTGATTGTTTGGCTGCGGCATAATGTCATCAGGACTGGTTTACGCAACATCAGCATATCATATTCACGCATCTCGCTGGCTGATGTAGCTAAAAAGTTGAGGTTGAACTCTGCAAGTCCTGTTGCTGATGCTGAGAGCATTGTAGCAAAGGCTATCCGTGATGGGGCTATTGATGCTTCATTGGATCATGCCAATGGGTGGATGGTGTCCAAGGAAACTGGAGATATTTACTCTACAAATGAGCCTCAGTTGGCATTTAATTCTCGGATTGCCTTTTGTCTTAACATGCACAATGAGGCTGTTCGAGCACTGCATTTTCCACCAAACACGCACAAGGAAAAGGAAAGTGCTGAGAAGAGGAGAGAGAGGCAACAACAAGAGCAAGAATTGGCTAAGCATATTGCAGAGGAAGATGATGATGATTTCTGA 825 0.4412 MEVDSATSAIQTLAAKHLLPELEIYCYLLVLLFLIDQKRYHVVESCSCQSLFLSLNRRTVDVIASRLYFYYSYSYELTGDLAEIRGNLLVLHRIATLRHDELGQAVRIGDLELFRNVAEKFGTTFNRDRTHNLIVWLRHNVIRTGLRNISISYSRISLADVAKKLRLNSASPVADAESIVAKAIRDGAIDASLDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALHFPPNTHKEKESAEKRRERQQQEQELAKHIAEEDDDDF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00040 274 Pfam Proteasome regulatory subunit C-terminal 207 273 IPR013586 GO:0000502|GO:0030234|GO:0042176
Pumo9g00040 274 Coils Coil 241 268 - -
Pumo9g00040 274 ProSiteProfiles PCI domain profile. 41 207 IPR000717 -
Pumo9g00040 274 SUPERFAMILY "Winged helix" DNA-binding domain 132 208 IPR036390 -
Pumo9g00040 274 Gene3D - 93 233 - -
Pumo9g00040 274 MobiDBLite consensus disorder prediction 239 267 - -
Pumo9g00040 274 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 132 225 IPR000717 -
Pumo9g00040 274 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 12 105 - -
Pumo9g00040 274 Pfam PCI domain 102 203 IPR000717 -
Pumo9g00040 274 MobiDBLite consensus disorder prediction 239 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00040 Pumo-Chr9 559736 563491 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00040 9 559736 563491 Pumo9g00040 9 559736 563491 ECH