Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo9g00014 | ATGGAGATTTGGAGATTCATGGAGTTAAAAGGTGTTAGCATGAACAATATATGCTCATCTCTTATGATGCAGGCCCTTTGTAAAGGGGGTTACTTGGAAGAGGCCTTTGATACCGTTGACTATCTTGGAGGAAGTCAACGTCTCTATCCAGTTCTCCCACTGTACAATAGTCTCTTAAGATCCTGCACAGAAATGCAGAATAAAATTCAAGCAAGTAGATGTTTGGACTTAATGGAAAAGAAGATGGTAGGGAAGAATGAAGTTACATATACCGAGCTTCTCAAGCTTGCAGTTTTGCAGAAAAATTTGCCTGCAGCCCATCTCATTTGGCAGGAGTATATTAAAAACTATAGCATGAGTATCACTGCTCTGCGTAGATTCATTTGGTCATTTACAAAGTTAGGAGATTTAGAATCTGCATATAAAATACTACTACAAATGGTGTCATTAGCCTTCAGGGGAAACATTTCTATTGCTAGAACAGTTTATGGGAAGTTGTATACTACTAGACTGGACATCCCTGTGCCTTCAATTAAGGGGCTAGGCTCAACCATATTGGACTTGAAGGAGAACAATAAATTGGATTCTTGTATACACCCTCCTCTTATGTATATACCTGACAGTATTTCTGCAAGTATAGAGCAACAGATTATTTGTGCAGGGAATAAAAAAGCTAAGAGTACCAAATTAGTTGGGCTGAATGGACAAAAACACGAGCTGCTTAAGGTGTTGAGCTGGTCCTTTAATGATATAATACATGGGTGTGCAAAACAAGAGAATTATATGCTTGCAAGGAAGCTTATGTTACAGATGAAAAATCTTGGTTTGCAGCCATCCAGACATACATATAATGCCATTATTAAAGTTGTTTCTCTTAGAAGTTTTGGGGATGCCATAAGAGTGTTGAAAAAGATGCAGCAGAAGAATTTGAAGCCATATGATTCAACTCTAGCAACACTTTCAATCACTTGCAGCAAAGGACTACAACTGGATTTAGCTGAGGCTTTTCTGAATCAAATTTCTGAATGTCTATACCCACATCCTTATAATGCTTTGCTAGCATCATGCAATCAACTGAATCAACTTGAACGTGCTATACGAGTGTTTGCCAAGATGACGCAGAAAAAAGTTTTACCTAATATCAGGACATGTGAGCTTCTATTTTCGTTATTTGGTGTTGTAAATGCCCATTATGAAGACAGTAATATGCTGTCACAGGTGGAGGCTGCTAAAAGAATAAATGCTATAGAAAAGCATATGGCCAAAAATGGCATTCAGCATAGTCACCTTTCAATGAATAACTTATTGAGAGCCCTTGGAGAAGAAGGGATGATAAGAGAGTTGATCCAATATTTACATGTGGCAGAGAATCTTTTCATTTATAGAAACCCTTCATTGGGAACACATACGTACAACACAGTGTTACATTATCTTGTTGAAGCCAAGGAAAGTGACATGGCGATTGCAATTTTCAAGAAGATGAAGTTATGTGGCTGCCACCCTGATTCTGAAACATACAATATAATGATCGACTGTTGTACCATCCTAAAAAGTTACAGATCTGCTTGTTTGCTGCTTTCAATGATGATACGGAAAGGGTTTCAACCAGTGATTTGTACATATACCGCTATCATTGAGATTTTGTTGGAAGATGAGAAATTTAATGAAGCCCTGAATCTTTTGAAACAAGTCATATTGGATGGCATCCAACCTGATGTACTGCTGTTTAATACAGTTCTTAAAGAAGCATGCTACAAGGGAAGGATCGATGTAATTGAGTTTATTGTGGAGTGTATGCACCGAGAGAAAGTTCCCCCTGATACAAGAACATGCGGCTATGTCTTCTCTGCATATGTAAATTCTGGTTTTCACAATACAGCAATTGAAGCATTGCAGGTTTTAAGTTTGCGTATGATGTCCGAAGATGGCAACATACTTAGAGAGAAGAAAAATTTTGTGAATGAATTCATTCTATCTGAAGATTTGGCTGTTGAGTCACAGATACTTAAATTATTTGAAGATTCTGAAGATGAATATGCAGTTGGGTTGTTGAATTTAAGATGGTGTGCCATGTCTGGGTTCCCAATCTGCGAGTCAGCTGATCAAAGCCTATGGGCTAAAAGACTGGAAGGAATGCAATTGAGCCTGAGTCCTATCAAGACACCCAGCTAG | 2172 | 0.3817 | MEIWRFMELKGVSMNNICSSLMMQALCKGGYLEEAFDTVDYLGGSQRLYPVLPLYNSLLRSCTEMQNKIQASRCLDLMEKKMVGKNEVTYTELLKLAVLQKNLPAAHLIWQEYIKNYSMSITALRRFIWSFTKLGDLESAYKILLQMVSLAFRGNISIARTVYGKLYTTRLDIPVPSIKGLGSTILDLKENNKLDSCIHPPLMYIPDSISASIEQQIICAGNKKAKSTKLVGLNGQKHELLKVLSWSFNDIIHGCAKQENYMLARKLMLQMKNLGLQPSRHTYNAIIKVVSLRSFGDAIRVLKKMQQKNLKPYDSTLATLSITCSKGLQLDLAEAFLNQISECLYPHPYNALLASCNQLNQLERAIRVFAKMTQKKVLPNIRTCELLFSLFGVVNAHYEDSNMLSQVEAAKRINAIEKHMAKNGIQHSHLSMNNLLRALGEEGMIRELIQYLHVAENLFIYRNPSLGTHTYNTVLHYLVEAKESDMAIAIFKKMKLCGCHPDSETYNIMIDCCTILKSYRSACLLLSMMIRKGFQPVICTYTAIIEILLEDEKFNEALNLLKQVILDGIQPDVLLFNTVLKEACYKGRIDVIEFIVECMHREKVPPDTRTCGYVFSAYVNSGFHNTAIEALQVLSLRMMSEDGNILREKKNFVNEFILSEDLAVESQILKLFEDSEDEYAVGLLNLRWCAMSGFPICESADQSLWAKRLEGMQLSLSPIKTPS | 723 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo9g00014 | 723 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 502 | 536 | IPR002885 | - | |
| Pumo9g00014 | 723 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 467 | 501 | IPR002885 | - | |
| Pumo9g00014 | 723 | Pfam | PPR repeat family | 468 | 513 | IPR002885 | - | |
| Pumo9g00014 | 723 | Pfam | PPR repeat family | 247 | 288 | IPR002885 | - | |
| Pumo9g00014 | 723 | Gene3D | Tetratricopeptide repeat domain | 326 | 405 | IPR011990 | GO:0005515 | |
| Pumo9g00014 | 723 | Gene3D | Tetratricopeptide repeat domain | 547 | 649 | IPR011990 | GO:0005515 | |
| Pumo9g00014 | 723 | Gene3D | Tetratricopeptide repeat domain | 234 | 325 | IPR011990 | GO:0005515 | |
| Pumo9g00014 | 723 | Pfam | PPR repeat | 20 | 38 | IPR002885 | - | |
| Pumo9g00014 | 723 | NCBIfam | pentatricopeptide repeat | 349 | 380 | IPR002885 | - | |
| Pumo9g00014 | 723 | NCBIfam | pentatricopeptide repeat | 247 | 279 | IPR002885 | - | |
| Pumo9g00014 | 723 | NCBIfam | pentatricopeptide repeat | 505 | 536 | IPR002885 | - | |
| Pumo9g00014 | 723 | NCBIfam | pentatricopeptide repeat | 469 | 503 | IPR002885 | - | |
| Pumo9g00014 | 723 | Gene3D | Tetratricopeptide repeat domain | 1 | 171 | IPR011990 | GO:0005515 | |
| Pumo9g00014 | 723 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 345 | 379 | IPR002885 | - | |
| Pumo9g00014 | 723 | Gene3D | Tetratricopeptide repeat domain | 406 | 530 | IPR011990 | GO:0005515 | |
| Pumo9g00014 | 723 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 244 | 278 | IPR002885 | - | |
| Pumo9g00014 | 723 | Pfam | Pentatricopeptide repeat domain | 349 | 392 | IPR002885 | - | |
| Pumo9g00014 | 723 | Pfam | Pentatricopeptide repeat domain | 525 | 581 | IPR002885 | - | |
| Pumo9g00014 | 723 | Pfam | Pentatricopeptide repeat domain | 55 | 96 | IPR002885 | - | |
| Pumo9g00014 | 723 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN | 1 | 710 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo9g00014 | 9 | 276494 | 286424 | Pumo9g00014 | 9 | 276494 | 286424 | ECH |