Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00961 ATGAAGTTCAAGACCCTTAGCAACAACAACCAACCTCAATCTTCTTCTGTGTCAGAGGTTGAGCAGGAGCAAGAAGAGGTGGCTAGGTGCTTGATGATGTTGTCCAAGGATTCTAGCTACAAGGGTCGTTTTTCTTTGCTCACAGAGTCTTCTGACAACAACTCGGTTGTTCTAGAGGCAAAGTCACCTTCTCTTGATACCAAGGTTACTATGATGAATAGTAATGGTAAGAATTCTATGTCTAGTGCTTATGAGTTTGCGGAGAAGAAGCTGCAGCTGGAGCACAAGGATATGAAGTTTAAGTCTGCTGAGATTGGCTATGATTCTGATAATTCAGATTCTGGGTATTTTAGATATGGTCCTAAGTCAGATGATTCAAATGATGGGTTTTTCAGGAATGAGGTTAAGTCTTCTAAAATGGGGTACTTGTCCGGGTTAGAGGAGTATGATGTTGAATCAAGGAAGGTGCTGAGCAGAGGAAGAAGCAGGAGCACTGAATTTAAGAAATTTGTTTTGGAGGATTGGGAGAATGATAGAGATGATGGTGGGGCTGCAAGGAAATTTGATTCAAAGAAGTTTAAGAGATCCAACTATGATTCTCTTGGTCAAAATTTAGGTGGTGTTTCTAGCAGGAAGATGGGGAATGGTTTCACCAATGATGGGATCAACAAGTATGAGTGCTTGACTAGTGAAAGGGACAATGGCTCTGATGATTCAGCTTATGAGAGTGATGAGAACAGCACAGACACTGATTCTTATCCTGCTCCAAAGGCTCACAGCAACAGGAACAGCCTCAGTGGTCAGAAGAAGGGGAAGAAGAAATTGAAGTCAAAGAAAAGCAAGGCACATGAGTGCCCAATCTGCAACAAAATTTTCAGGTCAGGCCAAGCCTTGGGGGGTCACAAAAGATCCCATTTTGTTGGAGGGTCTGAGGAAAACACCCTTGTGATAAGGCCAGGGGCTCCTTCTGCTGTTCCTTGCCTCATTGATCTCAATCTACCAGCACCTGTTGATGAATAG 1020 0.4314 MKFKTLSNNNQPQSSSVSEVEQEQEEVARCLMMLSKDSSYKGRFSLLTESSDNNSVVLEAKSPSLDTKVTMMNSNGKNSMSSAYEFAEKKLQLEHKDMKFKSAEIGYDSDNSDSGYFRYGPKSDDSNDGFFRNEVKSSKMGYLSGLEEYDVESRKVLSRGRSRSTEFKKFVLEDWENDRDDGGAARKFDSKKFKRSNYDSLGQNLGGVSSRKMGNGFTNDGINKYECLTSERDNGSDDSAYESDENSTDTDSYPAPKAHSNRNSLSGQKKGKKKLKSKKSKAHECPICNKIFRSGQALGGHKRSHFVGGSEENTLVIRPGAPSAVPCLIDLNLPAPVDE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00961 339 MobiDBLite consensus disorder prediction 1 21 - -
Pumo8g00961 339 ProSiteProfiles Zinc finger C2H2 type domain profile. 283 305 IPR013087 -
Pumo8g00961 339 MobiDBLite consensus disorder prediction 228 281 - -
Pumo8g00961 339 MobiDBLite consensus disorder prediction 246 265 - -
Pumo8g00961 339 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 7 339 - -
Pumo8g00961 339 MobiDBLite consensus disorder prediction 266 280 - -
Pumo8g00961 339 SUPERFAMILY beta-beta-alpha zinc fingers 280 306 IPR036236 -
Pumo8g00961 339 MobiDBLite consensus disorder prediction 1 23 - -
Pumo8g00961 339 Pfam C2H2-type zinc finger 282 305 - -
Pumo8g00961 339 ProSitePatterns Zinc finger C2H2 type domain signature. 285 305 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00961 Pumo-Chr8 35200250 35202502 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pumo8g00961 zf-C2H2_6 6.3e-11 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00961 8 35200250 35202502 Pumo8g00961 8 35200250 35202502 ECH