Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00926 ATGCCGTCAGTGCATCGGGGAAACTTCTTCAATCGCCAAACCCAATTCTCCGAACGGAGGCAGAAGATTATACAGCAGAGGAAGTCTCTTCCGATTGCTCCAGTTGAGAAAAGACTGGTTGAAGAGGTTCGGAAGAACGATGTGTTGATTATTGTTGGTGAAACTGGAAGTGGAAAGACTACTCAGATTCCGCAGTTTCTGTTTGATGCTGGATTTTGCCGTGATGGAAGGGTTATTGGGATAACGCAGCCTAGACGTGTGGCTGCTGTCACTGTGGCGAAACGCGTTGCTGAGGAATGTGGTGTTGAGTTGGGCCAGAAGGTCGGGTATTCCGTTAGGTTTGATGATGCTACTTTTGGGTCAACAAGGATCAAATATATGACAGATGGGTTGCTTTTGAGGGAAGCATTGTTGGATCCATATCTTTCTAAGTATTCTGTTATAATTGTTGATGAAGCACATGAGAGGACTGTTCACACTGATGTCTTGATGGGCTTGCTAAAAAACGTACAACTTGCTCGGTCAAGTTCTTTAAGTGGTGGTCAAGGCCTTAATTTTGGAAACAAGAATATGAATAAGTTGTTGGAGAAAGAAAATGATCAGAGTGGCAGTTTTCTTAAAAAGCACCGCCATGAGAAGTATGCTCCATTGAAGTTAATCATCATGTCTGCAAGTCTTGATGCACGCACTTTCTCTGAGTACTTTGGTGGTGCCAAAGCTGTTCACATCCAAGGGAGACAGTTTCCTGTAGATATATTTTATACTCGCGATGCAGAGACAGATTATTTAGATGCTTCCTTGATAACAATATTCCAGATTCATTTAGAGGAGGGCCCTGGTGATATACTAGTATTTCTGACTGGGCAAGAAGAGATTGAATCTGTTGAAAGGCTTATCAACGAGAAACTCCCACAATTACCTCAAGAAAGTCAGAAGCTTCTAGTTGTGCCTATATTTGCAGCTCTTCCATCTGAGCAGCAAATGCAGGTCTTTGCACCAGCTCCATCTGGGTTTCGGAAGGTGATATTGGCAACTAATATTGCTGAGACATCAGTAACAATTCCTGGAATCAAGTATGTAATTGATCCTGGATTTGTTAAAGCACGTTCTTATGACCCTGGAAAAGGCATGGAATCCTTGATTATAATACCTACATCCAAGTCCCAAGCTCTGCAAAGAAGTGGGCGTGCAGGGCGTGAAGGACCTGGAAAATGCTTCCGTCTATATCCTGAAAGAGAATTTGAGAAACTTGAGGATTCAACAATGCCAGAGATTAAGCGTTGCAACCTTTCTAATGTCATTTTGCAGCTTAAGGCTTTGGGTGTTGATGACATATTAGGGTTTGATTTCATTGAGAAACCTTCAAGGGCAGCTATTATAAAATCATTGGAGCAGCTATTTTTGTTAGGTGCTCTAACAGATGAATGTCAACTATCTGATCCTGTTGGGCATCAAATGGCTCGACTGCCCTTGGATCCTGTTTATTCCAAAGCTCTTATTTTAGCTAGTCAGTTTAACTGCTTGGAGGAGATGTTGATAACTGTGGCAATGCTGTCTGTGGAATCCATATTTTATAGTCCTCGTGACAAGTTAGAAGAGGCAAGAACTGCAACAAAATGCTTCTCAAGTCCAGAGGGAGACCACATCACTTTGATTAATGTGTATCGAGCATCTAATGATTTCTTGGAGAAGAGGTCAATGGAAATGAGTACGGCAAAGACTGAAAAGGTTTATAGAAAATGGTGCAAAGAAAATTTTATTAATAGCCGGTCTCTTAGACATGCTCGTGACATTCACAGGTAA 1803 0.4182 MPSVHRGNFFNRQTQFSERRQKIIQQRKSLPIAPVEKRLVEEVRKNDVLIIVGETGSGKTTQIPQFLFDAGFCRDGRVIGITQPRRVAAVTVAKRVAEECGVELGQKVGYSVRFDDATFGSTRIKYMTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSSSLSGGQGLNFGNKNMNKLLEKENDQSGSFLKKHRHEKYAPLKLIIMSASLDARTFSEYFGGAKAVHIQGRQFPVDIFYTRDAETDYLDASLITIFQIHLEEGPGDILVFLTGQEEIESVERLINEKLPQLPQESQKLLVVPIFAALPSEQQMQVFAPAPSGFRKVILATNIAETSVTIPGIKYVIDPGFVKARSYDPGKGMESLIIIPTSKSQALQRSGRAGREGPGKCFRLYPEREFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECQLSDPVGHQMARLPLDPVYSKALILASQFNCLEEMLITVAMLSVESIFYSPRDKLEEARTATKCFSSPEGDHITLINVYRASNDFLEKRSMEMSTAKTEKVYRKWCKENFINSRSLRHARDIHR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00926 600 CDD SF2_C_RHA 248 409 - -
Pumo8g00926 600 Gene3D - 5 246 IPR027417 -
Pumo8g00926 600 FunFam ATP-dependent RNA helicase DHX8 448 545 - -
Pumo8g00926 600 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 40 244 IPR014001 -
Pumo8g00926 600 Gene3D - 247 420 IPR027417 -
Pumo8g00926 600 Gene3D - 448 544 - -
Pumo8g00926 600 Pfam Helicase conserved C-terminal domain 271 400 IPR001650 -
Pumo8g00926 600 CDD DEXHc_DHX33 30 243 - -
Pumo8g00926 600 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 267 441 IPR001650 -
Pumo8g00926 600 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 247 421 - -
Pumo8g00926 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 590 IPR027417 -
Pumo8g00926 600 SMART ha2_5 461 552 IPR007502 GO:0004386
Pumo8g00926 600 SMART ultradead3 28 253 IPR014001 -
Pumo8g00926 600 SMART helicmild6 293 401 IPR001650 -
Pumo8g00926 600 Pfam Helicase associated domain (HA2) 462 586 IPR007502 GO:0004386
Pumo8g00926 600 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 146 155 IPR002464 -
Pumo8g00926 600 PANTHER ATP-DEPENDENT RNA HELICASE 18 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00926 Pumo-Chr8 34645271 34655137 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00926 8 34645271 34655137 Pumo8g00926 8 34645271 34655137 ECH