Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00378 ATGGCCACTCTTCAGAGTTGGAGAAAAGCCTATGGCGCCATCAAAGACACCACCAAAGTCGGTCTCGCTCATGTCAACAGCGATTATGCGGACTTGGACGTTGCCGTAGTCAAAGCCACCAACCACGTCGAGTGTCCTCCCAAAGAGAGACACCTTCGAAAGATTTTGTTCGCAACTTCTGCTGTACGGCCTAGAGCTGATGTTGCTTACTGCATTCATGCGCTCGCGCGTCGATTGGCCAAGACGCGAAACTGGACGGTGGCATTGAAAACATTGATTGTCATTCATAGGTTATTGAGGGAGGGTGATCCTACTCTTAGAGAAGAATTTCTTAATTTCTCACAGAGGGGGCGCATACTCCAACTTTCTAATTTCAAAGATGATTCTAGCCCAATTGCTTGGGATTGTTCTGCCTGGGTACGTACTTATGCATTATATTTGGAAGAAAGACTTGAATGTTTCCAGATTTTGAAGTATGATATTGAAGCTGAGCGTCTACCTAAGCCTGTTGCTGGGCAGGACAAGGGGTACAGCAGGACCAGGGATTTGAATAGTGAGGAGCTATTGGAGCAATTGCCTGCTTTGCAGCAGTTGCTCTATCGTCTTGTTGGTTGTCGTCCAGAAGGAGCAGCTGTTAGCAACTATGTGATACAATATGCCCTGGCTCTGGTTCTGAAAGAGAGCTTTAAAATTTATTGTGCTATTAATGACGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGCCCAGACATGAAGCTATCAAAGCCTTTGATGTCTATAAACGTGCGGGTCAGCAGGCGGAAAGTCTCTCTGATTTCTATGAAATATGCAAAAGACTGGAACTTGCTAGGAATTTTCAGTTTCCTGTTTTAAGAGAGCCTCCACAATCATTTCTTGTAACCATGGAAGAATACATAAAGGATGCACCGCGAGTGGTTACAGTTCCAAGTGAGCCATTGTTATTGTTGACTTACAGACCAGAACATGTTCCCACAATAGAAGATGATAAATTATCTGAAGAACAGGAGCCATCAGTGCCTGTTGATGATGTTGTCTCAAATTCTGAGCTTGCTCCTCCTCCTCCACCATCTCACAACAATTTTGAAACTGGAGACTTACTGGGTTTGAATGACAGTACACCTGATGCATCCTTGATAGAAGAAAGAAACGCTCTTGCCCTAGCCATAGTCCCCACCGAAACTGGAACTACTGCTTTAGATTCAAGTGCTGCTCAGGCCAGAGATTTTGATACAACTGGATGGGAGCTTGCCCTGGTCTCCACTCCAAGTACCAATGTTTCTTCAGTCAATGAGAGACAATTGGCTGGTGGATTGGATTCTCTCACCCTTAACAGCTTATATGATGAAGGAGCATATAGATCTGCACAGCAACCAGTATATGGAGTGCCAGCCCCAAATCCATTTGACGTGCAAGATCCTTTTGCTTTATCAAGTAGCATCCCTCCTCCACCAACTGTACAAATGGCAGCAATTGCTCAACAGCATATAAATCCATTCCTTCATTACCAACCATATCAGCCACTGCAGCAGCAGCATATGCTGATGAACCAAGCAAATCCCTTTGGGGATGCAGGATACGGGGCATTTCCTGTTAATCCTGTTTCTCACCCTCATAATAACAATCCATTTGGAAGCACTGGCTTGATATAG 1674 0.4444 MATLQSWRKAYGAIKDTTKVGLAHVNSDYADLDVAVVKATNHVECPPKERHLRKILFATSAVRPRADVAYCIHALARRLAKTRNWTVALKTLIVIHRLLREGDPTLREEFLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALYLEERLECFQILKYDIEAERLPKPVAGQDKGYSRTRDLNSEELLEQLPALQQLLYRLVGCRPEGAAVSNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKAFDVYKRAGQQAESLSDFYEICKRLELARNFQFPVLREPPQSFLVTMEEYIKDAPRVVTVPSEPLLLLTYRPEHVPTIEDDKLSEEQEPSVPVDDVVSNSELAPPPPPSHNNFETGDLLGLNDSTPDASLIEERNALALAIVPTETGTTALDSSAAQARDFDTTGWELALVSTPSTNVSSVNERQLAGGLDSLTLNSLYDEGAYRSAQQPVYGVPAPNPFDVQDPFALSSSIPPPPTVQMAAIAQQHINPFLHYQPYQPLQQQHMLMNQANPFGDAGYGAFPVNPVSHPHNNNPFGSTGLI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00378 557 SMART enth_2 30 161 IPR013809 -
Pumo8g00378 557 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Pumo8g00378 557 Gene3D - 6 161 IPR008942 -
Pumo8g00378 557 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Pumo8g00378 557 SUPERFAMILY GAT-like domain 178 309 - -
Pumo8g00378 557 FunFam Putative clathrin assembly protein 173 321 - -
Pumo8g00378 557 FunFam Clathrin assembly protein AP180 6 161 - -
Pumo8g00378 557 CDD ANTH_N 32 154 - -
Pumo8g00378 557 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 502 IPR045192 GO:0048268|GO:0072583
Pumo8g00378 557 MobiDBLite consensus disorder prediction 337 381 - -
Pumo8g00378 557 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Pumo8g00378 557 Gene3D ANTH domain 173 321 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00378 Pumo-Chr8 11867928 11880144 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00378 8 11867928 11880144 Pumo8g00378 8 11867928 11880144 ECH