Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00370 ATGAAACGCAGTTTCCTCCTTTCTCTCTTATTCTTCACATTCACACTCTCCATTCTCACCCCAACCGCCACCGCCGGCGACGGTTACGTTTCCGGTTCCGGTTCCGGCGACTCTGACGCCGACTTCATCCGCGCAAGCTGCAACGCGACGCTGTACCCCGACCTGTGCTTCTCCTCCCTCTCCCGCTACGCCGGCGCGGTGCAGCGCAGCCACGCCGCCCTCGCGCGCGTCGCCGTGGCGGTGGCGCTCTCGAAGGCGCACGGCGCCGCGGCCTACCTCTCGCACCAGACCACGGCGGCCGCCGGCGACGAGGACTCCGGCGCCGGCGCCGCCCTGCACGACTGCTTCTCGAACCTGGAGGACGCGGTGGACGAGATCCGCGGCTCGCTGAAGCAGATGCGGCGGCTGAGGCCGGATGCGGACGACTCCGGCTCGGTCCGGTTCGGGCTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACGTGCACGGACGGGTTCGAGGGCGTAGAGGAAGGTCCCGTGAAGACGAGCGTATGCGATCGCGTCACCAGGGTCAAGAAGTTCACCAGCAATGCCTTGGCGCTGGTTAACGGTTTCGCCAATAACTTATAA 627 0.6587 MKRSFLLSLLFFTFTLSILTPTATAGDGYVSGSGSGDSDADFIRASCNATLYPDLCFSSLSRYAGAVQRSHAALARVAVAVALSKAHGAAAYLSHQTTAAAGDEDSGAGAALHDCFSNLEDAVDEIRGSLKQMRRLRPDADDSGSVRFGLSNVLTWMSAALTDEETCTDGFEGVEEGPVKTSVCDRVTRVKKFTSNALALVNGFANNL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00370 208 SMART PMEI_2 38 200 IPR006501 GO:0004857
Pumo8g00370 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 200 - -
Pumo8g00370 208 FunFam Pectin methylesterase inhibitor 1 38 204 - -
Pumo8g00370 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 204 IPR035513 -
Pumo8g00370 208 Pfam Plant invertase/pectin methylesterase inhibitor 41 200 IPR006501 GO:0004857
Pumo8g00370 208 CDD PMEI-like_3 45 206 - -
Pumo8g00370 208 NCBIfam pectinesterase inhibitor domain 8 202 IPR006501 GO:0004857
Pumo8g00370 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00370 Pumo-Chr8 11728387 11729372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00370 43 208 Carbohydrate Esterase AT5G53370 28.571 1.58e-14 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00370 8 11728387 11729372 Pumo8g00370 8 11728387 11729372 ECH